RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	HEM15	P16622	393 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	DAP2	P18962	818 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	RSA4	P25382	515 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	MGT1	P26188	188 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	TPS2	P31688	896 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	CSE2	P33308	149 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	ZTA1	P38230	334 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	POP4	P38336	279 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YHL026C	P38740	315 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	AVT2	P39981	480 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YGL108C	P53139	140 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	RMD9	P53140	646 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	EFM5	P53200	248 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	DUG3	P53871	357 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YNL040W	P53960	456 aa	Predicted RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	THI7	Q05998	598 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	DNL4	Q08387	944 aa	Predicted RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	UBX3	Q12229	455 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	RDL1	Q12305	139 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	RRD2	Q12461	358 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	MTR10	Q99189	972 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	TDH1	P00360	332 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	GPH1	P06738	902 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	COR1	P07256	457 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YMR085W	P0CF18	432 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	TAL1	P15019	335 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	PRP2	P20095	876 aa	Predicted RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	SLY1	P22213	666 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YCR006C	P25350	157 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	MEI4	P29467	408 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	DEP1	P31385	405 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	SAC1	P32368	623 aa	Known RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	HIR2	P32480	875 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	KDX1	P36005	433 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	TRS85	P46944	698 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	ATG27	P46989	271 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YPR003C	P53394	754 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
RCM1	YNL022C	BET4	Q00618	327 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	SHR3	Q02774	210 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	ECM18	Q04623	453 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	PRM6	Q04705	352 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	YLR413W	Q06689	675 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	APC2	Q12440	853 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	MRPL23	Q12487	163 aa	Predicted RBP	4.18	□□□□□ -1.74
RCM1	YNL022C	YDR524C-B	Q3E6R4	66 aa		4.18	□□□□□ -1.74
RCM1	YNL022C	ASF2	P32448	525 aa	Predicted RBP	4.17	□□□□□ -1.74
RCM1	YNL022C	HOT13	P36078	116 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	YBP1	P38315	674 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	MBB1	P39534	108 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	AIM22	P47051	409 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	STP1	Q00947	519 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	YMR102C	Q03177	834 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	YMR027W	Q04371	470 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	TAF9	Q05027	157 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	ORM2	Q06144	216 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	ARR1	Q06596	294 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	BSP1	Q06604	576 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	RAD34	Q06665	692 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	YFH1	Q07540	174 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	THP1	Q08231	455 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	RBD2	Q12270	262 aa		4.17	□□□□□ -1.74
RCM1	YNL022C	YLR422W	Q06409	1932 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	UBR2	Q07963	1872 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	CAR1	P00812	333 aa	Known RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	AQY1	P0CD91	305 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	UNG1	P12887	359 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	ELO2	P25358	347 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	RIM1	P32445	135 aa	Known RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	MSN4	P33749	630 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	MRPL37	P36532	105 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	YHB1	P39676	399 aa	Known RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	UTP18	P40362	594 aa	Predicted RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	VHS2	P40463	436 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	PRM1	P53835	661 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	YNL143C	P53908	130 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	OCA2	P53949	197 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	MSC1	Q03104	513 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	RTN1	Q04947	295 aa	Known RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	PKH2	Q12236	1081 aa	Known RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	NCA2	Q12374	616 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	AHC1	Q12433	566 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	BRR1	Q99177	341 aa	Predicted RBP	4.16	□□□□□ -1.74
RCM1	YNL022C	IZH4	Q99393	312 aa		4.16	□□□□□ -1.74
RCM1	YNL022C	STE2	D6VTK4	431 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	TEF1	P02994	458 aa	Known RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	CHO1	P08456	276 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	PMR1	P13586	950 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	BEM1	P29366	551 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	MGM101	P32787	269 aa	Known RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	REC114	P32841	428 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	BUD2	P33314	1104 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RCM1	YNL022C	CUE2	P36075	443 aa	Known RBP	4.15	□□□□□ -1.75
RCM1	YNL022C	ECM4	P36156	370 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	YBR062C	P38239	180 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	SCC4	P40090	624 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	DSN1	P40568	576 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	RRT5	P43607	289 aa		4.15	□□□□□ -1.75
RCM1	YNL022C	SNG1	P46950	547 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms