RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YOS9Q99220 542 aa3.74□□□□□ -1.81
PUB1YNL016W LAA1P39526 2014 aa3.74□□□□□ -1.81
PUB1YNL016W GCN1P33892 2672 aaKnown RBP3.73□□□□□ -1.81
PUB1YNL016W PEP4P07267 405 aaKnown RBP3.73□□□□□ -1.81
PUB1YNL016W SPO11P23179 398 aa3.73□□□□□ -1.81
PUB1YNL016W HXT2P23585 541 aa3.73□□□□□ -1.81
PUB1YNL016W PTC6P25646 442 aa3.73□□□□□ -1.81
PUB1YNL016W ZIP1P31111 875 aa3.73□□□□□ -1.81
PUB1YNL016W YPS1P32329 569 aa3.73□□□□□ -1.81
PUB1YNL016W ECT1P33412 323 aa3.73□□□□□ -1.81
PUB1YNL016W PAD1P33751 242 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
PUB1YNL016W THI80P35202 319 aa3.73□□□□□ -1.81
PUB1YNL016W RPC25P35718 212 aa3.73□□□□□ -1.81
PUB1YNL016W GMH1P36125 273 aa3.73□□□□□ -1.81
PUB1YNL016W QDR3P38227 689 aa3.73□□□□□ -1.81
PUB1YNL016W IML3P38265 245 aa3.73□□□□□ -1.81
PUB1YNL016W MED6P38782 295 aa3.73□□□□□ -1.81
PUB1YNL016W ALP1P38971 573 aa3.73□□□□□ -1.81
PUB1YNL016W PLB1P39105 664 aa3.73□□□□□ -1.81
PUB1YNL016W YER186CP40101 306 aa3.73□□□□□ -1.81
PUB1YNL016W PCI8P40512 444 aa3.73□□□□□ -1.81
PUB1YNL016W PAC11P40960 533 aa3.73□□□□□ -1.81
PUB1YNL016W BNA6P43619 295 aa3.73□□□□□ -1.81
PUB1YNL016W TAX4P47030 604 aa3.73□□□□□ -1.81
PUB1YNL016W HAM1P47119 197 aaKnown RBP3.73□□□□□ -1.81
PUB1YNL016W YDL186WP48568 277 aa3.73□□□□□ -1.81
PUB1YNL016W MUP1P50276 574 aa3.73□□□□□ -1.81
PUB1YNL016W YIP4P53093 235 aa3.73□□□□□ -1.81
PUB1YNL016W YNL146WP53906 100 aa3.73□□□□□ -1.81
PUB1YNL016W SHR3Q02774 210 aa3.73□□□□□ -1.81
PUB1YNL016W YMR310CQ04867 317 aaPredicted RBP3.73□□□□□ -1.81
PUB1YNL016W YLR283WQ05867 314 aa3.73□□□□□ -1.81
PUB1YNL016W YDL086WQ07505 273 aa3.73□□□□□ -1.81
PUB1YNL016W TGS1Q12052 315 aa3.73□□□□□ -1.81
PUB1YNL016W NCE102Q12207 173 aaRIP-Chip data3.73□□□□□ -1.81not detected
PUB1YNL016W YDR262WQ12331 272 aa3.73□□□□□ -1.81
PUB1YNL016W ZPS1Q12512 249 aa3.73□□□□□ -1.81
PUB1YNL016W RRP12Q12754 1228 aaKnown RBP3.73□□□□□ -1.81
PUB1YNL016W CDC21P06785 304 aa3.72□□□□□ -1.81
PUB1YNL016W ADE5,7P07244 802 aaKnown RBP3.72□□□□□ -1.81
PUB1YNL016W NFT1P0CE68 1218 aa3.72□□□□□ -1.81
PUB1YNL016W TCP1P12612 559 aaKnown RBP3.72□□□□□ -1.81
PUB1YNL016W DAL81P21657 970 aa3.72□□□□□ -1.81
PUB1YNL016W RHB1P25378 209 aa3.72□□□□□ -1.81
PUB1YNL016W GDA1P32621 518 aa3.72□□□□□ -1.81
PUB1YNL016W RAD23P32628 398 aaKnown RBP3.72□□□□□ -1.81
PUB1YNL016W NRP1P32770 719 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PUB1YNL016W YSC83P32792 385 aa3.72□□□□□ -1.81
PUB1YNL016W CYM1P32898 989 aa3.72□□□□□ -1.81
PUB1YNL016W IMP3P32899 183 aaPredicted RBP3.72□□□□□ -1.81
PUB1YNL016W RPC34P32910 317 aa3.72□□□□□ -1.81
PUB1YNL016W MTR2P34232 184 aaKnown RBP3.72□□□□□ -1.81
PUB1YNL016W MRX3P38172 270 aa3.72□□□□□ -1.81
PUB1YNL016W SBE22P38814 852 aa3.72□□□□□ -1.81
PUB1YNL016W YHR177WP38867 453 aa3.72□□□□□ -1.81
PUB1YNL016W GAT2P40209 560 aa3.72□□□□□ -1.81
PUB1YNL016W YPS6P40583 537 aa3.72□□□□□ -1.81
PUB1YNL016W YAR1P46683 200 aa3.72□□□□□ -1.81
PUB1YNL016W FMP33P46998 180 aa3.72□□□□□ -1.81
PUB1YNL016W YNL247WP53852 767 aaKnown RBP3.72□□□□□ -1.81
PUB1YNL016W ALG11P53954 548 aaKnown RBP3.72□□□□□ -1.81
PUB1YNL016W STP1Q00947 519 aa3.72□□□□□ -1.81
PUB1YNL016W ROT1Q03691 256 aa3.72□□□□□ -1.81
PUB1YNL016W URH1Q04179 340 aa3.72□□□□□ -1.81
PUB1YNL016W TMN2Q04562 672 aa3.72□□□□□ -1.81
PUB1YNL016W CSM3Q04659 317 aa3.72□□□□□ -1.81
PUB1YNL016W PDR8Q06149 701 aa3.72□□□□□ -1.81
PUB1YNL016W CTS2Q06350 511 aa3.72□□□□□ -1.81
PUB1YNL016W IES4Q08561 116 aa3.72□□□□□ -1.81
PUB1YNL016W PEX27Q08580 376 aa3.72□□□□□ -1.81
PUB1YNL016W RPS10AQ08745 105 aaPredicted RBP3.72□□□□□ -1.81
PUB1YNL016W MLH3Q12083 715 aa3.72□□□□□ -1.81
PUB1YNL016W RKI1Q12189 258 aa3.72□□□□□ -1.81
PUB1YNL016W RMD5Q12508 421 aa3.72□□□□□ -1.81
PUB1YNL016W YKL033W-AQ86ZR7 236 aa3.72□□□□□ -1.81
PUB1YNL016W LAG2Q92325 660 aa3.72□□□□□ -1.81
PUB1YNL016W POL30P15873 258 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W ATP10P18496 279 aa3.71□□□□□ -1.82
PUB1YNL016W STE4P18851 423 aa3.71□□□□□ -1.82
PUB1YNL016W YPK2P18961 677 aa3.71□□□□□ -1.82
PUB1YNL016W ACP1P32463 125 aa3.71□□□□□ -1.82
PUB1YNL016W HXT1P32465 570 aa3.71□□□□□ -1.82
PUB1YNL016W SKG6P32900 734 aaPredicted RBP3.71□□□□□ -1.82
PUB1YNL016W RRN10P38204 145 aa3.71□□□□□ -1.82
PUB1YNL016W DBP8P38719 431 aa3.71□□□□□ -1.82
PUB1YNL016W YPT35P38815 214 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W YHB1P39676 399 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W PRP39P39682 629 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W STE24P47154 453 aa3.71□□□□□ -1.82
PUB1YNL016W HSH155P49955 971 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W STB4P50104 949 aa3.71□□□□□ -1.82
PUB1YNL016W RET3P53600 189 aa3.71□□□□□ -1.82
PUB1YNL016W YMR178WQ03219 274 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W COX20Q04935 205 aa3.71□□□□□ -1.82
PUB1YNL016W MRPL35Q06678 367 aa3.71□□□□□ -1.82
PUB1YNL016W BSC6Q08280 497 aa3.71□□□□□ -1.82
PUB1YNL016W ATG31Q12421 196 aa3.71□□□□□ -1.82
PUB1YNL016W LAS17Q12446 633 aa3.71□□□□□ -1.82
PUB1YNL016W AIM45Q12480 344 aaKnown RBP3.71□□□□□ -1.82
PUB1YNL016W SPO24Q3E752 67 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms