RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YMR310CQ04867 317 aaPredicted RBP4.3□□□□□ -1.72
CBF5YLR175W YEH1Q07804 573 aa4.3□□□□□ -1.72
CBF5YLR175W PSY3Q12318 242 aa4.3□□□□□ -1.72
CBF5YLR175W WTM1Q12363 437 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W TY1A-NL1Q12391 440 aaKnown RBP4.3□□□□□ -1.72
CBF5YLR175W YOL159C-AQ3E769 90 aa4.3□□□□□ -1.72
CBF5YLR175W AI1P03875 834 aa4.29□□□□□ -1.72
CBF5YLR175W COR1P07256 457 aa4.29□□□□□ -1.72
CBF5YLR175W YAP1P19880 650 aaKnown RBP4.29□□□□□ -1.72
CBF5YLR175W VPS33P20795 691 aa4.29□□□□□ -1.72
CBF5YLR175W CLB4P24871 460 aa4.29□□□□□ -1.72
CBF5YLR175W ARP2P32381 391 aaKnown RBP4.29□□□□□ -1.72
CBF5YLR175W NRP1P32770 719 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
CBF5YLR175W YHR177WP38867 453 aa4.29□□□□□ -1.72
CBF5YLR175W VMA10P48836 114 aaKnown RBP4.29□□□□□ -1.72
CBF5YLR175W RMR1P53060 241 aa4.29□□□□□ -1.72
CBF5YLR175W RHO4Q00246 291 aa4.29□□□□□ -1.72
CBF5YLR175W APC4Q04601 652 aa4.29□□□□□ -1.72
CBF5YLR175W YLR456WQ06199 204 aa4.29□□□□□ -1.72
CBF5YLR175W ARR1Q06596 294 aa4.29□□□□□ -1.72
CBF5YLR175W MMT2Q08970 484 aa4.29□□□□□ -1.72
CBF5YLR175W YDR061WQ12298 539 aa4.29□□□□□ -1.72
CBF5YLR175W IRA2P19158 3079 aa4.28□□□□□ -1.72
CBF5YLR175W SNF4P12904 322 aa4.28□□□□□ -1.72
CBF5YLR175W ATR1P13090 542 aa4.28□□□□□ -1.72
CBF5YLR175W FBA1P14540 359 aaKnown RBP4.28□□□□□ -1.72
CBF5YLR175W MER1P16523 270 aa4.28□□□□□ -1.72
CBF5YLR175W HOP1P20050 605 aa4.28□□□□□ -1.72
CBF5YLR175W IMG1P25626 169 aa4.28□□□□□ -1.72
CBF5YLR175W TAH1P25638 111 aaPredicted RBP4.28□□□□□ -1.72
CBF5YLR175W RPC82P32349 654 aa4.28□□□□□ -1.72
CBF5YLR175W TAF14P35189 244 aa4.28□□□□□ -1.72
CBF5YLR175W MDJ1P35191 511 aa4.28□□□□□ -1.72
CBF5YLR175W SLM4P38247 162 aa4.28□□□□□ -1.72
CBF5YLR175W YBR238CP38330 731 aaKnown RBP4.28□□□□□ -1.72
CBF5YLR175W YEL020CP39994 560 aa4.28□□□□□ -1.72
CBF5YLR175W YJL068CP40363 299 aa4.28□□□□□ -1.72
CBF5YLR175W MPM1P40364 252 aa4.28□□□□□ -1.72
CBF5YLR175W IBA57P47158 497 aa4.28□□□□□ -1.72
CBF5YLR175W YJR142WP47173 342 aa4.28□□□□□ -1.72
CBF5YLR175W UBC9P50623 157 aaPredicted RBP4.28□□□□□ -1.72
CBF5YLR175W ASI2P53895 289 aa4.28□□□□□ -1.72
CBF5YLR175W ERG13P54839 491 aaKnown RBP4.28□□□□□ -1.72
CBF5YLR175W SKI8Q02793 397 aaPredicted RBP4.28□□□□□ -1.72
CBF5YLR175W RRN5Q02983 363 aa4.28□□□□□ -1.72
CBF5YLR175W MSC1Q03104 513 aa4.28□□□□□ -1.72
CBF5YLR175W RQC1Q05468 723 aaKnown RBP4.28□□□□□ -1.72
CBF5YLR175W SPO77Q06134 477 aa4.28□□□□□ -1.72
CBF5YLR175W DBP9Q06218 594 aaKnown RBP4.28□□□□□ -1.72
CBF5YLR175W GIC2Q06648 383 aa4.28□□□□□ -1.72
CBF5YLR175W YLR036CQ07986 203 aa4.28□□□□□ -1.72
CBF5YLR175W BSC6Q08280 497 aa4.28□□□□□ -1.72
CBF5YLR175W MCA1Q08601 432 aa4.28□□□□□ -1.72
CBF5YLR175W YTM1Q12024 460 aaPredicted RBP4.28□□□□□ -1.72
CBF5YLR175W YOR342CQ12182 319 aa4.28□□□□□ -1.72
CBF5YLR175W YDL199CQ12407 687 aa4.28□□□□□ -1.72
CBF5YLR175W YKL033W-AQ86ZR7 236 aa4.28□□□□□ -1.72
CBF5YLR175W ACC1Q00955 2233 aaKnown RBP4.27□□□□□ -1.73
CBF5YLR175W GAL4P04386 881 aa4.27□□□□□ -1.73
CBF5YLR175W GPH1P06738 902 aaKnown RBP4.27□□□□□ -1.73
CBF5YLR175W RPL11AP0C0W9 174 aaKnown RBP4.27□□□□□ -1.73
CBF5YLR175W RPB5P20434 215 aa4.27□□□□□ -1.73
CBF5YLR175W POL4P25615 582 aa4.27□□□□□ -1.73
CBF5YLR175W CMK1P27466 446 aaKnown RBP4.27□□□□□ -1.73
CBF5YLR175W LOT5P34234 306 aa4.27□□□□□ -1.73
CBF5YLR175W HCS1P34243 683 aa4.27□□□□□ -1.73
CBF5YLR175W SPC34P36131 295 aa4.27□□□□□ -1.73
CBF5YLR175W MRPL15P36523 253 aa4.27□□□□□ -1.73
CBF5YLR175W MTG2P38860 518 aa4.27□□□□□ -1.73
CBF5YLR175W AIM2P39721 246 aa4.27□□□□□ -1.73
CBF5YLR175W TPA1P40032 644 aaKnown RBP4.27□□□□□ -1.73
CBF5YLR175W FAU1P40099 211 aa4.27□□□□□ -1.73
CBF5YLR175W YIL086CP40503 102 aa4.27□□□□□ -1.73
CBF5YLR175W ARF3P40994 183 aaRIP-Chip data4.27□□□□□ -1.73not detected
CBF5YLR175W RPL10P41805 221 aaKnown RBP4.27□□□□□ -1.73
CBF5YLR175W ELP2P42935 788 aa4.27□□□□□ -1.73
CBF5YLR175W YGR201CP42936 225 aa4.27□□□□□ -1.73
CBF5YLR175W MRK1P50873 501 aa4.27□□□□□ -1.73
CBF5YLR175W BUD9P53226 547 aa4.27□□□□□ -1.73
CBF5YLR175W NRM1P53718 249 aa4.27□□□□□ -1.73
CBF5YLR175W REC102Q02721 264 aa4.27□□□□□ -1.73
CBF5YLR175W BSC1Q12140 328 aa4.27□□□□□ -1.73
CBF5YLR175W SFM1Q12314 213 aa4.27□□□□□ -1.73
CBF5YLR175W RPL11BQ3E757 174 aaPredicted RBP4.27□□□□□ -1.73
CBF5YLR175W HBN1Q96VH4 193 aa4.27□□□□□ -1.73
CBF5YLR175W CSF1Q12150 2958 aa4.27□□□□□ -1.73
CBF5YLR175W ZWF1P11412 505 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W DBP3P20447 523 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W DBP2P24783 546 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W CHA1P25379 360 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W NTG1P31378 399 aa4.26□□□□□ -1.73
CBF5YLR175W CDC12P32468 407 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W MKK1P32490 508 aa4.26□□□□□ -1.73
CBF5YLR175W HBS1P32769 611 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W MRPL6P32904 214 aa4.26□□□□□ -1.73
CBF5YLR175W BET3P36149 193 aa4.26□□□□□ -1.73
CBF5YLR175W SWD1P39706 426 aa4.26□□□□□ -1.73
CBF5YLR175W THO1P40040 218 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W RIO2P40160 425 aaKnown RBP4.26□□□□□ -1.73
CBF5YLR175W LYS12P40495 371 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms