RNA–Protein interactions for RNA: YLR136C

TIS11, Transcript of mRNA-binding protein expressed during iron starvation, yeast

Gene TIS11, Length 858 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIS11	YLR136C	TY1B-MR1	Q04214	1755 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	TY1B-MR2	Q04670	1755 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	TY1B-LR1	Q12088	1755 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	TY1B-NL1	Q12112	1755 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	TY1B-GR1	Q12141	1755 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	TY1B-BL	Q12490	1755 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	SNQ2	P32568	1501 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	VTH1	P40438	1549 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	VTH2	P40890	1549 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	RPL20A	P0CX23	172 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	RPL20B	P0CX24	172 aa	Predicted RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	ARF1	P11076	181 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	SLM5	P25345	492 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	YBR056W	P38081	501 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	BZZ1	P38822	633 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	YHR122W	P38829	231 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	FAA2	P39518	744 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	RPH1	P39956	796 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	YFR016C	P43597	1233 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	TOS3	P43637	560 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	AZR1	P50080	613 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	COS1	P53822	381 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	HXT11	P54862	567 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	YPL068C	Q02749	293 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	YPL199C	Q08954	240 aa		4.12	□□□□□ -1.75
TIS11	YLR136C	TPT1	Q12272	230 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	RPA190	P10964	1664 aa	Known RBP	4.12	□□□□□ -1.75
TIS11	YLR136C	DNF1	P32660	1571 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	CBP2	P03874	630 aa	Predicted RBP	4.11	□□□□□ -1.75
TIS11	YLR136C	RPS16A	P0CX51	143 aa	Known RBP	4.11	□□□□□ -1.75
TIS11	YLR136C	RPS16B	P0CX52	143 aa	Known RBP	4.11	□□□□□ -1.75
TIS11	YLR136C	GRR1	P24814	1151 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	KKQ8	P36004	724 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	MIX23	P38162	196 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	ATM1	P40416	690 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	MKT1	P40850	830 aa	Known RBP	4.11	□□□□□ -1.75
TIS11	YLR136C	YMR181C	Q03231	154 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	ASA1	Q06822	443 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	LDS2	Q08218	356 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	TSC11	P40061	1430 aa		4.11	□□□□□ -1.75
TIS11	YLR136C	NTE1	Q04958	1679 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	SLY1	P22213	666 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	MSK1	P32048	576 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	PPQ1	P32945	549 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	SPT10	P35208	640 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	DOA1	P36037	715 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	ATP3	P38077	311 aa	Known RBP	4.1	□□□□□ -1.75
TIS11	YLR136C	LCP5	P40079	357 aa	Predicted RBP	4.1	□□□□□ -1.75
TIS11	YLR136C	YJL070C	P40361	888 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	OST1	P41543	476 aa	Known RBP	4.1	□□□□□ -1.75
TIS11	YLR136C	SFH5	P47008	294 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	ABM1	P47146	123 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	YGR117C	P53270	476 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	CAF40	P53829	373 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	CUR1	Q06469	252 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	NCA2	Q12374	616 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	RRP12	Q12754	1228 aa	Known RBP	4.1	□□□□□ -1.75
TIS11	YLR136C	ULS1	Q08562	1619 aa		4.1	□□□□□ -1.75
TIS11	YLR136C	VPS63	O13549	108 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	ATP1	P07251	545 aa	Known RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	SSC1	P0CS90	654 aa	Known RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	DBR1	P24309	405 aa	Known RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	RIB5	P38145	238 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	SSO2	P39926	295 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	MPP10	P47083	593 aa	Known RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	RRP46	P53256	223 aa	Predicted RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	AIM33	Q04516	312 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	YMR310C	Q04867	317 aa	Predicted RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	BCH1	Q05029	724 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	THP3	Q12049	470 aa	Known RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	RRP36	Q12481	300 aa	Predicted RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	SET6	Q12529	373 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	FSH3	Q99369	266 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	STH1	P32597	1359 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	TRM732	Q03496	1420 aa		4.09	□□□□□ -1.75
TIS11	YLR136C	PDR15	Q04182	1529 aa	Known RBP	4.09	□□□□□ -1.75
TIS11	YLR136C	RPO21	P04050	1733 aa	Known RBP	4.09	□□□□□ -1.76
TIS11	YLR136C	TPK3	P05986	398 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	CDC37	P06101	506 aa	Known RBP	4.08	□□□□□ -1.76
TIS11	YLR136C	RPC40	P07703	335 aa	Known RBP	4.08	□□□□□ -1.76
TIS11	YLR136C	MAS1	P10507	462 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	GAL3	P13045	520 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	CAP2	P13517	287 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	MCK1	P21965	375 aa	Known RBP	4.08	□□□□□ -1.76
TIS11	YLR136C	HXT2	P23585	541 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	EXG1	P23776	448 aa	Known RBP	4.08	□□□□□ -1.76
TIS11	YLR136C	YCL068C	P25593	260 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	HMX1	P32339	317 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	ALP1	P38971	573 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	JLP2	P40206	208 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	AIM20	P40451	204 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	SCS3	P53012	380 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	RAX1	Q08760	435 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	YOP1	Q12402	180 aa		4.08	□□□□□ -1.76
TIS11	YLR136C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
TIS11	YLR136C	RNR2	P09938	399 aa	Known RBP	4.07	□□□□□ -1.76
TIS11	YLR136C	MAS2	P11914	482 aa		4.07	□□□□□ -1.76
TIS11	YLR136C	DAL80	P26343	269 aa		4.07	□□□□□ -1.76
TIS11	YLR136C	SKT5	P34226	696 aa		4.07	□□□□□ -1.76
TIS11	YLR136C	MRPL40	P36534	297 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms