RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR1	YKR101W	MRS3	P10566	314 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	RNA1	P11745	407 aa	Known RBP	4.25	□□□□□ -1.73
SIR1	YKR101W	GCD2	P12754	651 aa	Predicted RBP	4.25	□□□□□ -1.73
SIR1	YKR101W	TIP1	P27654	210 aa	Predicted RBP	4.25	□□□□□ -1.73
SIR1	YKR101W	ATS1	P31386	333 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	GLC7	P32598	312 aa	Known RBP	4.25	□□□□□ -1.73
SIR1	YKR101W	YHR122W	P38829	231 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	YJL070C	P40361	888 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	SPG5	P42933	373 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	RET3	P53600	189 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	RPM2	Q02773	1202 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	SGT1	Q08446	395 aa		4.25	□□□□□ -1.73
SIR1	YKR101W	DNF2	Q12675	1612 aa		4.24	□□□□□ -1.73
SIR1	YKR101W	SLM5	P25345	492 aa	Known RBP	4.24	□□□□□ -1.73
SIR1	YKR101W	MSK1	P32048	576 aa		4.24	□□□□□ -1.73
SIR1	YKR101W	YNK1	P36010	153 aa	Known RBP	4.24	□□□□□ -1.73
SIR1	YKR101W	ALP1	P38971	573 aa		4.24	□□□□□ -1.73
SIR1	YKR101W	MMF1	P40185	145 aa	Known RBP	4.24	□□□□□ -1.73
SIR1	YKR101W	MKT1	P40850	830 aa	Known RBP	4.24	□□□□□ -1.73
SIR1	YKR101W	AIP1	P46680	615 aa	Known RBP	4.24	□□□□□ -1.73
SIR1	YKR101W	BET5	Q03630	159 aa		4.24	□□□□□ -1.73
SIR1	YKR101W	ECM18	Q04623	453 aa		4.24	□□□□□ -1.73
SIR1	YKR101W	YMR310C	Q04867	317 aa	Predicted RBP	4.24	□□□□□ -1.73
SIR1	YKR101W	SPO24	Q3E752	67 aa		4.24	□□□□□ -1.73
SIR1	YKR101W	TEF1	P02994	458 aa	Known RBP	4.23	□□□□□ -1.73
SIR1	YKR101W	GAL7	P08431	366 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	YBR056W	P38081	501 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	YBL028C	P38202	106 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	LOC1	P43586	204 aa	Predicted RBP	4.23	□□□□□ -1.73
SIR1	YKR101W	RPN14	P53196	417 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	RRN9	P53437	365 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	ALF1	P53904	254 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	AIM33	Q04516	312 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	YAP7	Q08182	245 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	LDS2	Q08218	356 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	TIM18	Q08749	192 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	YBT1	P32386	1661 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	ARG4	P04076	463 aa	Predicted RBP	4.23	□□□□□ -1.73
SIR1	YKR101W	HEM2	P05373	342 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	LOS1	P33418	1100 aa	Predicted RBP	4.23	□□□□□ -1.73
SIR1	YKR101W	CUE2	P36075	443 aa	Known RBP	4.23	□□□□□ -1.73
SIR1	YKR101W	YHR218W	P38899	603 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	IKS1	P47042	667 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	YPL068C	Q02749	293 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	ARR1	Q06596	294 aa		4.23	□□□□□ -1.73
SIR1	YKR101W	MRPL23	Q12487	163 aa	Predicted RBP	4.23	□□□□□ -1.73
SIR1	YKR101W	RNR2	P09938	399 aa	Known RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	SAM1	P10659	382 aa	Known RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	PUT4	P15380	627 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	PET18	P25362	215 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	HMX1	P32339	317 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	MST28	P39552	234 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	SHO1	P40073	367 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	LCP5	P40079	357 aa	Predicted RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	SNL1	P40548	159 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	GCD14	P46959	383 aa	Predicted RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	PNC1	P53184	216 aa	Known RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	STP1	Q00947	519 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	YLR297W	Q05899	129 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	DSE3	Q08729	430 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	FSH3	Q99369	266 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	SAM2	P19358	384 aa	Known RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	RRP3	P38712	501 aa	Known RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	ATM1	P40416	690 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	RIB4	P50861	169 aa	Predicted RBP	4.22	□□□□□ -1.73
SIR1	YKR101W	YGL114W	P53134	725 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	POP6	P53218	158 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	MRP51	Q02950	344 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	YLR413W	Q06689	675 aa		4.22	□□□□□ -1.73
SIR1	YKR101W	ARF1	P11076	181 aa	Known RBP	4.21	□□□□□ -1.74
SIR1	YKR101W	ZUO1	P32527	433 aa	Known RBP	4.21	□□□□□ -1.74
SIR1	YKR101W	SPT10	P35208	640 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	YBR137W	P38276	179 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	SWC5	P38326	303 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	ARC40	P38328	384 aa	Known RBP	4.21	□□□□□ -1.74
SIR1	YKR101W	PRP39	P39682	629 aa	Known RBP	4.21	□□□□□ -1.74
SIR1	YKR101W	TOS3	P43637	560 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	ABM1	P47146	123 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	DBP6	P53734	629 aa	Known RBP	4.21	□□□□□ -1.74
SIR1	YKR101W	COS1	P53822	381 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	PIR3	Q03180	325 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	CAB5	Q03941	241 aa		4.21	□□□□□ -1.74
SIR1	YKR101W	NDC1	P32500	655 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	PTR2	P32901	601 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	MTC4	P38335	694 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	YND1	P40009	630 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	HCR1	Q05775	265 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	NCA2	Q12374	616 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	TPK3	P05986	398 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	ATP1	P07251	545 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	CKI1	P20485	582 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	RNA14	P25298	677 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	ATP3	P38077	311 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	END3	P39013	349 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	LYS12	P40495	371 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	PCI8	P40512	444 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	DIM1	P41819	318 aa	Known RBP	4.2	□□□□□ -1.74
SIR1	YKR101W	LAM5	P43560	674 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	AZR1	P50080	613 aa		4.2	□□□□□ -1.74
SIR1	YKR101W	YNL146W	P53906	100 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms