RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	YCR007C	P25354	239 aa		4.8	□□□□□ -1.64
SKG1	YKR100C	SWH1	P35845	1188 aa		4.8	□□□□□ -1.64
SKG1	YKR100C	YEL057C	P39983	233 aa		4.8	□□□□□ -1.64
SKG1	YKR100C	ALG8	P40351	577 aa		4.8	□□□□□ -1.64
SKG1	YKR100C	SPG3	Q04398	127 aa	Predicted RBP	4.8	□□□□□ -1.64
SKG1	YKR100C	YLR012C	Q07927	99 aa		4.8	□□□□□ -1.64
SKG1	YKR100C	SMC6	Q12749	1114 aa		4.8	□□□□□ -1.64
SKG1	YKR100C	RRP12	Q12754	1228 aa	Known RBP	4.8	□□□□□ -1.64
SKG1	YKR100C	HSH49	Q99181	213 aa	Predicted RBP	4.8	□□□□□ -1.64
SKG1	YKR100C	PMR1	P13586	950 aa		4.79	□□□□□ -1.64
SKG1	YKR100C	ART10	P18634	518 aa	Known RBP	4.79	□□□□□ -1.64
SKG1	YKR100C	CCT6	P39079	546 aa		4.79	□□□□□ -1.64
SKG1	YKR100C	ZRG17	P53735	605 aa		4.79	□□□□□ -1.64
SKG1	YKR100C	MZM1	Q03429	123 aa	Predicted RBP	4.79	□□□□□ -1.64
SKG1	YKR100C	OPY2	Q06810	360 aa		4.79	□□□□□ -1.64
SKG1	YKR100C	AKR2	Q12013	749 aa		4.79	□□□□□ -1.64
SKG1	YKR100C	YBR126W-A	Q8TGU7	68 aa		4.79	□□□□□ -1.64
SKG1	YKR100C	CCW14	O13547	238 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	PUT3	P25502	979 aa	Predicted RBP	4.78	□□□□□ -1.64
SKG1	YKR100C	MRPL15	P36523	253 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	SIP3	P38717	1229 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	YEL068C	P39977	110 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	HAT2	P39984	401 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	MKT1	P40850	830 aa	Known RBP	4.78	□□□□□ -1.64
SKG1	YKR100C	GLG2	P47011	380 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	HSH155	P49955	971 aa	Known RBP	4.78	□□□□□ -1.64
SKG1	YKR100C	IRC15	Q02733	499 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	NGL3	Q03210	505 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	YDR131C	Q03899	556 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	PHO92	Q06390	306 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	HNT3	Q08702	217 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	YDR018C	Q12185	396 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	Q0297	Q9ZZV8	51 aa		4.78	□□□□□ -1.64
SKG1	YKR100C	JHD2	P47156	728 aa	Predicted RBP	4.77	□□□□□ -1.65
SKG1	YKR100C	DUO1	P53168	247 aa	Known RBP	4.77	□□□□□ -1.65
SKG1	YKR100C	MSO1	P53604	210 aa	Known RBP	4.77	□□□□□ -1.65
SKG1	YKR100C	IPI3	P53877	555 aa		4.77	□□□□□ -1.65
SKG1	YKR100C	VPS74	Q06385	345 aa		4.77	□□□□□ -1.65
SKG1	YKR100C	SIL1	Q08199	421 aa		4.77	□□□□□ -1.65
SKG1	YKR100C	LSP1	Q12230	341 aa	Known RBP	4.77	□□□□□ -1.65
SKG1	YKR100C	SFI1	Q12369	946 aa		4.77	□□□□□ -1.65
SKG1	YKR100C	RPS8A	P0CX39	200 aa	Known RBP	4.76	□□□□□ -1.65
SKG1	YKR100C	RPS8B	P0CX40	200 aa	Known RBP	4.76	□□□□□ -1.65
SKG1	YKR100C	EST1	P17214	699 aa	Predicted RBP	4.76	□□□□□ -1.65
SKG1	YKR100C	MSP1	P28737	362 aa		4.76	□□□□□ -1.65
SKG1	YKR100C	EFB1	P32471	206 aa	Known RBP	4.76	□□□□□ -1.65
SKG1	YKR100C	SKN1	P33336	771 aa		4.76	□□□□□ -1.65
SKG1	YKR100C	RRN11	Q04712	507 aa		4.76	□□□□□ -1.65
SKG1	YKR100C	RNH1	Q04740	348 aa		4.76	□□□□□ -1.65
SKG1	YKR100C	RRP45	Q05636	305 aa	Known RBP	4.76	□□□□□ -1.65
SKG1	YKR100C	THP1	Q08231	455 aa		4.76	□□□□□ -1.65
SKG1	YKR100C	VPS68	Q12016	184 aa		4.76	□□□□□ -1.65
SKG1	YKR100C	NAT1	P12945	854 aa	Known RBP	4.75	□□□□□ -1.65
SKG1	YKR100C	SPS100	P13130	326 aa		4.75	□□□□□ -1.65
SKG1	YKR100C	SRV2	P17555	526 aa	Known RBP	4.75	□□□□□ -1.65
SKG1	YKR100C	RNA14	P25298	677 aa	Known RBP	4.75	□□□□□ -1.65
SKG1	YKR100C	ELO2	P25358	347 aa		4.75	□□□□□ -1.65
SKG1	YKR100C	MCM10	P32354	571 aa		4.75	□□□□□ -1.65
SKG1	YKR100C	YKL102C	P34249	101 aa		4.75	□□□□□ -1.65
SKG1	YKR100C	MUD2	P36084	527 aa	Known RBP	4.75	□□□□□ -1.65
SKG1	YKR100C	LYS1	P38998	373 aa	RIP-Chip data	4.75	□□□□□ -1.65	not detected
SKG1	YKR100C	YIL086C	P40503	102 aa		4.75	□□□□□ -1.65
SKG1	YKR100C	NOP58	Q12499	511 aa	Known RBP	4.75	□□□□□ -1.65
SKG1	YKR100C	YER078W-A	Q3E7A2	54 aa		4.75	□□□□□ -1.65
SKG1	YKR100C	THR4	P16120	514 aa	Known RBP	4.74	□□□□□ -1.65
SKG1	YKR100C	FUN19	P28003	413 aa	Predicted RBP	4.74	□□□□□ -1.65
SKG1	YKR100C	MRPL4	P36517	319 aa		4.74	□□□□□ -1.65
SKG1	YKR100C	TCM62	P38228	572 aa	Known RBP	4.74	□□□□□ -1.65
SKG1	YKR100C	DED81	P38707	554 aa	Known RBP	4.74	□□□□□ -1.65
SKG1	YKR100C	SSU1	P41930	458 aa		4.74	□□□□□ -1.65
SKG1	YKR100C	RPN14	P53196	417 aa		4.74	□□□□□ -1.65
SKG1	YKR100C	CUR1	Q06469	252 aa		4.74	□□□□□ -1.65
SKG1	YKR100C	PLB3	Q08108	686 aa		4.74	□□□□□ -1.65
SKG1	YKR100C	MSA1	Q08471	629 aa		4.74	□□□□□ -1.65
SKG1	YKR100C	EXO70	P19658	623 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	MNE1	P24720	663 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	SSH4	P32343	579 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	MSN2	P33748	704 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	BNA4	P38169	460 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	URA8	P38627	578 aa	Predicted RBP	4.73	□□□□□ -1.65
SKG1	YKR100C	ALG5	P40350	334 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	GWT1	P47026	490 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	RSC1	P53236	928 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	GPI1	P53306	609 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	ARE2	P53629	642 aa	Known RBP	4.73	□□□□□ -1.65
SKG1	YKR100C	ADD37	Q03233	198 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	YEH1	Q07804	573 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	APC5	Q08683	685 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	YPT6	Q99260	215 aa		4.73	□□□□□ -1.65
SKG1	YKR100C	AIM22	P47051	409 aa		4.72	□□□□□ -1.65
SKG1	YKR100C	IMD4	P50094	524 aa	Known RBP	4.72	□□□□□ -1.65
SKG1	YKR100C	CPR1	P14832	162 aa	Known RBP	4.71	□□□□□ -1.66
SKG1	YKR100C	PEP3	P27801	918 aa		4.71	□□□□□ -1.66
SKG1	YKR100C	OCA1	P50946	238 aa	Predicted RBP	4.71	□□□□□ -1.66
SKG1	YKR100C	RBS1	Q05672	457 aa	Known RBP	4.71	□□□□□ -1.66
SKG1	YKR100C	NMD4	Q12129	218 aa		4.71	□□□□□ -1.66
SKG1	YKR100C	TPO4	Q12256	659 aa		4.71	□□□□□ -1.66
SKG1	YKR100C	PEX11	Q12462	236 aa		4.71	□□□□□ -1.66
SKG1	YKR100C	MSR1	P38714	643 aa		4.7	□□□□□ -1.66
SKG1	YKR100C	FAD1	P38913	306 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms