RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SEC9P40357 651 aa1.42□□□□□ -2.18
RPL40BYKR094C VHS2P40463 436 aa1.42□□□□□ -2.18
RPL40BYKR094C SAS2P40963 338 aa1.42□□□□□ -2.18
RPL40BYKR094C VMA13P41807 478 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C YIP5P53108 310 aa1.42□□□□□ -2.18
RPL40BYKR094C MLC1P53141 149 aa1.42□□□□□ -2.18
RPL40BYKR094C YDR541CQ03049 344 aa1.42□□□□□ -2.18
RPL40BYKR094C RPN9Q04062 393 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C YET2Q04210 160 aa1.42□□□□□ -2.18
RPL40BYKR094C RIF2Q06208 395 aa1.42□□□□□ -2.18
RPL40BYKR094C PIN3Q06449 215 aa1.42□□□□□ -2.18
RPL40BYKR094C YPR195CQ06594 109 aa1.42□□□□□ -2.18
RPL40BYKR094C SOR2Q07786 357 aa1.42□□□□□ -2.18
RPL40BYKR094C SGT1Q08446 395 aa1.42□□□□□ -2.18
RPL40BYKR094C UAF30Q08747 228 aa1.42□□□□□ -2.18
RPL40BYKR094C SLF1Q12034 447 aaKnown RBP1.42□□□□□ -2.18
RPL40BYKR094C NFI1Q12216 726 aa1.42□□□□□ -2.18
RPL40BYKR094C RUP1Q12242 671 aa1.42□□□□□ -2.18
RPL40BYKR094C DST1P07273 309 aa1.41□□□□□ -2.18
RPL40BYKR094C VMA2P16140 517 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C ALG1P16661 449 aa1.41□□□□□ -2.18
RPL40BYKR094C KRR1P25586 316 aaPredicted RBP1.41□□□□□ -2.18
RPL40BYKR094C TPS2P31688 896 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C COX13P32799 129 aa1.41□□□□□ -2.18
RPL40BYKR094C PRY2P36110 329 aa1.41□□□□□ -2.18
RPL40BYKR094C HEL1P36113 551 aa1.41□□□□□ -2.18
RPL40BYKR094C ATP3P38077 311 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C OM14P38325 134 aa1.41□□□□□ -2.18
RPL40BYKR094C RRP4P38792 359 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C MNL1P38888 796 aa1.41□□□□□ -2.18
RPL40BYKR094C YER184CP39961 794 aa1.41□□□□□ -2.18
RPL40BYKR094C YIL089WP40500 205 aa1.41□□□□□ -2.18
RPL40BYKR094C YFL012WP43580 148 aa1.41□□□□□ -2.18
RPL40BYKR094C FYV8P46949 817 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C PHO86P46956 311 aa1.41□□□□□ -2.18
RPL40BYKR094C ROG1P53118 685 aa1.41□□□□□ -2.18
RPL40BYKR094C ALF1P53904 254 aa1.41□□□□□ -2.18
RPL40BYKR094C TPS1Q00764 495 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C BET5Q03630 159 aa1.41□□□□□ -2.18
RPL40BYKR094C TAF12Q03761 539 aa1.41□□□□□ -2.18
RPL40BYKR094C PRP42Q03776 544 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C YDR341CQ05506 607 aaKnown RBP1.41□□□□□ -2.18
RPL40BYKR094C YDR286CQ05530 114 aa1.41□□□□□ -2.18
RPL40BYKR094C YFH1Q07540 174 aa1.41□□□□□ -2.18
RPL40BYKR094C PGC1Q08959 321 aa1.41□□□□□ -2.18
RPL40BYKR094C RKM1Q08961 583 aaPredicted RBP1.41□□□□□ -2.18
RPL40BYKR094C ORT1Q12375 292 aa1.41□□□□□ -2.18
RPL40BYKR094C SKS1Q12505 502 aa1.41□□□□□ -2.18
RPL40BYKR094C SRN2Q99176 213 aa1.41□□□□□ -2.18
RPL40BYKR094C ADE4P04046 510 aaKnown RBP1.4□□□□□ -2.19
RPL40BYKR094C MSI1P13712 422 aa1.4□□□□□ -2.19
RPL40BYKR094C PRR1P28708 518 aa1.4□□□□□ -2.19
RPL40BYKR094C NRP1P32770 719 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
RPL40BYKR094C INM1P38710 295 aa1.4□□□□□ -2.19
RPL40BYKR094C MMF1P40185 145 aaKnown RBP1.4□□□□□ -2.19
RPL40BYKR094C GAT2P40209 560 aa1.4□□□□□ -2.19
RPL40BYKR094C PAC11P40960 533 aa1.4□□□□□ -2.19
RPL40BYKR094C YFR057WP43625 151 aa1.4□□□□□ -2.19
RPL40BYKR094C ASN2P49090 572 aaKnown RBP1.4□□□□□ -2.19
RPL40BYKR094C BNS1P50084 137 aa1.4□□□□□ -2.19
RPL40BYKR094C CUE3P53137 624 aaKnown RBP1.4□□□□□ -2.19
RPL40BYKR094C MPS2P53159 387 aa1.4□□□□□ -2.19
RPL40BYKR094C AQR1P53943 586 aa1.4□□□□□ -2.19
RPL40BYKR094C MEH1Q02205 184 aa1.4□□□□□ -2.19
RPL40BYKR094C MMT1Q03218 510 aa1.4□□□□□ -2.19
RPL40BYKR094C NSE1Q07913 336 aa1.4□□□□□ -2.19
RPL40BYKR094C GLE1Q12315 538 aa1.4□□□□□ -2.19
RPL40BYKR094C CEX1Q12453 761 aa1.4□□□□□ -2.19
RPL40BYKR094C NBL1Q3E7Y6 73 aa1.4□□□□□ -2.19
RPL40BYKR094C ARO3P14843 370 aaKnown RBP1.39□□□□□ -2.19
RPL40BYKR094C SEC63P14906 663 aa1.39□□□□□ -2.19
RPL40BYKR094C CDC50P25656 391 aa1.39□□□□□ -2.19
RPL40BYKR094C TOA1P32773 286 aa1.39□□□□□ -2.19
RPL40BYKR094C RPS0AP32905 252 aaKnown RBP1.39□□□□□ -2.19
RPL40BYKR094C DOA1P36037 715 aa1.39□□□□□ -2.19
RPL40BYKR094C UIP5P36137 443 aa1.39□□□□□ -2.19
RPL40BYKR094C MRPL27P36526 146 aaPredicted RBP1.39□□□□□ -2.19
RPL40BYKR094C GPI18P38211 433 aa1.39□□□□□ -2.19
RPL40BYKR094C YSW1P38280 609 aa1.39□□□□□ -2.19
RPL40BYKR094C RFC3P38629 340 aa1.39□□□□□ -2.19
RPL40BYKR094C STN1P38960 494 aa1.39□□□□□ -2.19
RPL40BYKR094C ATM1P40416 690 aa1.39□□□□□ -2.19
RPL40BYKR094C SNL1P40548 159 aa1.39□□□□□ -2.19
RPL40BYKR094C EGT2P42835 1041 aa1.39□□□□□ -2.19
RPL40BYKR094C RPA34P47006 233 aaPredicted RBP1.39□□□□□ -2.19
RPL40BYKR094C TOM22P49334 152 aa1.39□□□□□ -2.19
RPL40BYKR094C PHB2P50085 310 aa1.39□□□□□ -2.19
RPL40BYKR094C PRM1P53835 661 aa1.39□□□□□ -2.19
RPL40BYKR094C GPI15P53961 229 aa1.39□□□□□ -2.19
RPL40BYKR094C STD1Q02794 444 aa1.39□□□□□ -2.19
RPL40BYKR094C MDM30Q05930 598 aa1.39□□□□□ -2.19
RPL40BYKR094C SPH1Q06160 661 aa1.39□□□□□ -2.19
RPL40BYKR094C MCH1Q07376 486 aa1.39□□□□□ -2.19
RPL40BYKR094C AAD15Q08361 143 aa1.39□□□□□ -2.19
RPL40BYKR094C SKI7Q08491 747 aaPredicted RBP1.39□□□□□ -2.19
RPL40BYKR094C ATG34Q12292 412 aa1.39□□□□□ -2.19
RPL40BYKR094C ATP1P07251 545 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C ARF1P11076 181 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C TAL1P15019 335 aaKnown RBP1.38□□□□□ -2.19
RPL40BYKR094C TPM1P17536 199 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms