RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C YGR117CP53270 476 aa2.72□□□□□ -1.97
YPT52YKR014C TRM112P53738 135 aaPredicted RBP2.72□□□□□ -1.97
YPT52YKR014C KTR6P54070 446 aa2.72□□□□□ -1.97
YPT52YKR014C ERO1Q03103 563 aa2.72□□□□□ -1.97
YPT52YKR014C TDA1Q03533 586 aa2.72□□□□□ -1.97
YPT52YKR014C PDE2P06776 526 aa2.71□□□□□ -1.98
YPT52YKR014C MDH1P17505 334 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
YPT52YKR014C SKT5P34226 696 aa2.71□□□□□ -1.98
YPT52YKR014C STN1P38960 494 aa2.71□□□□□ -1.98
YPT52YKR014C SER3P40054 469 aa2.71□□□□□ -1.98
YPT52YKR014C YGR111WP53265 400 aa2.71□□□□□ -1.98
YPT52YKR014C MRPS16Q02608 121 aa2.71□□□□□ -1.98
YPT52YKR014C RNY1Q02933 434 aaKnown RBP2.71□□□□□ -1.98
YPT52YKR014C RCF1Q03713 159 aa2.71□□□□□ -1.98
YPT52YKR014C YPR091CQ06833 770 aa2.71□□□□□ -1.98
YPT52YKR014C DCI1Q08558 271 aa2.71□□□□□ -1.98
YPT52YKR014C YBL111CQ3E7Y5 667 aa2.71□□□□□ -1.98
YPT52YKR014C ALG1P16661 449 aa2.7□□□□□ -1.98
YPT52YKR014C SLM5P25345 492 aaKnown RBP2.7□□□□□ -1.98
YPT52YKR014C LRP1P38801 184 aaKnown RBP2.7□□□□□ -1.98
YPT52YKR014C SEO1P39709 593 aa2.7□□□□□ -1.98
YPT52YKR014C YER186CP40101 306 aa2.7□□□□□ -1.98
YPT52YKR014C TCB2P48231 1178 aa2.7□□□□□ -1.98
YPT52YKR014C APJ1P53940 528 aa2.7□□□□□ -1.98
YPT52YKR014C MCH1Q07376 486 aa2.7□□□□□ -1.98
YPT52YKR014C NSE1Q07913 336 aa2.7□□□□□ -1.98
YPT52YKR014C FOL3Q12676 427 aaPredicted RBP2.7□□□□□ -1.98
YPT52YKR014C YCR024C-BQ3E7Z8 88 aa2.7□□□□□ -1.98
YPT52YKR014C FAB1P34756 2278 aa2.7□□□□□ -1.98
YPT52YKR014C HSP82P02829 709 aaKnown RBP2.69□□□□□ -1.98
YPT52YKR014C PAB1P04147 577 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
YPT52YKR014C DEP1P31385 405 aa2.69□□□□□ -1.98
YPT52YKR014C SWI3P32591 825 aa2.69□□□□□ -1.98
YPT52YKR014C DOA1P36037 715 aa2.69□□□□□ -1.98
YPT52YKR014C ANR2P36090 516 aaPredicted RBP2.69□□□□□ -1.98
YPT52YKR014C ECM8P38246 354 aa2.69□□□□□ -1.98
YPT52YKR014C TIM17P39515 158 aa2.69□□□□□ -1.98
YPT52YKR014C JEM1P40358 645 aa2.69□□□□□ -1.98
YPT52YKR014C ATM1P40416 690 aa2.69□□□□□ -1.98
YPT52YKR014C LCB2P40970 561 aa2.69□□□□□ -1.98
YPT52YKR014C YJL055WP47044 245 aa2.69□□□□□ -1.98
YPT52YKR014C YPS5P53057 165 aa2.69□□□□□ -1.98
YPT52YKR014C VPS9P54787 451 aa2.69□□□□□ -1.98
YPT52YKR014C YMR010WQ03687 405 aa2.69□□□□□ -1.98
YPT52YKR014C GYL1Q04322 720 aa2.69□□□□□ -1.98
YPT52YKR014C YDR341CQ05506 607 aaKnown RBP2.69□□□□□ -1.98
YPT52YKR014C YLR456WQ06199 204 aa2.69□□□□□ -1.98
YPT52YKR014C YDL114WQ07530 308 aa2.69□□□□□ -1.98
YPT52YKR014C DNL4Q08387 944 aaPredicted RBP2.69□□□□□ -1.98
YPT52YKR014C FCY22Q12119 530 aa2.69□□□□□ -1.98
YPT52YKR014C CBP6P07253 162 aaPredicted RBP2.68□□□□□ -1.98
YPT52YKR014C ZRC1P20107 442 aa2.68□□□□□ -1.98
YPT52YKR014C LTV1P34078 463 aa2.68□□□□□ -1.98
YPT52YKR014C FAD1P38913 306 aa2.68□□□□□ -1.98
YPT52YKR014C TPS1Q00764 495 aaKnown RBP2.68□□□□□ -1.98
YPT52YKR014C SKI8Q02793 397 aaPredicted RBP2.68□□□□□ -1.98
YPT52YKR014C YOP1Q12402 180 aa2.68□□□□□ -1.98
YPT52YKR014C TPK3P05986 398 aa2.67□□□□□ -1.98
YPT52YKR014C STE7P06784 515 aa2.67□□□□□ -1.98
YPT52YKR014C PRB1P09232 635 aa2.67□□□□□ -1.98
YPT52YKR014C SSC1P0CS90 654 aaKnown RBP2.67□□□□□ -1.98
YPT52YKR014C ARF1P11076 181 aaKnown RBP2.67□□□□□ -1.98
YPT52YKR014C MNE1P24720 663 aa2.67□□□□□ -1.98
YPT52YKR014C PHO91P27514 894 aa2.67□□□□□ -1.98
YPT52YKR014C MDL1P33310 695 aa2.67□□□□□ -1.98
YPT52YKR014C YKL097CP34245 136 aa2.67□□□□□ -1.98
YPT52YKR014C MCR1P36060 302 aaKnown RBP2.67□□□□□ -1.98
YPT52YKR014C APE4P38821 490 aa2.67□□□□□ -1.98
YPT52YKR014C PTI1P39927 425 aaPredicted RBP2.67□□□□□ -1.98
YPT52YKR014C SEC9P40357 651 aa2.67□□□□□ -1.98
YPT52YKR014C BUD27P43573 796 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
YPT52YKR014C IGD1P43598 195 aa2.67□□□□□ -1.98
YPT52YKR014C GPM3Q12326 303 aa2.67□□□□□ -1.98
YPT52YKR014C HMS1Q12398 434 aa2.67□□□□□ -1.98
YPT52YKR014C PCL9Q12477 304 aa2.67□□□□□ -1.98
YPT52YKR014C PAR32Q12515 295 aaKnown RBP2.67□□□□□ -1.98
YPT52YKR014C CCH1P50077 2039 aa2.67□□□□□ -1.98
YPT52YKR014C NRP1P32770 719 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
YPT52YKR014C PFS1P38872 237 aa2.66□□□□□ -1.98
YPT52YKR014C GDI1P39958 451 aaKnown RBP2.66□□□□□ -1.98
YPT52YKR014C CHS6P40955 746 aa2.66□□□□□ -1.98
YPT52YKR014C STE24P47154 453 aa2.66□□□□□ -1.98
YPT52YKR014C YGL262WP53054 175 aa2.66□□□□□ -1.98
YPT52YKR014C FLC3P53121 802 aa2.66□□□□□ -1.98
YPT52YKR014C YPL107WQ02873 248 aa2.66□□□□□ -1.98
YPT52YKR014C PRP3Q03338 469 aaPredicted RBP2.66□□□□□ -1.98
YPT52YKR014C MFG1Q07684 458 aa2.66□□□□□ -1.98
YPT52YKR014C SPE3Q12074 293 aaKnown RBP2.66□□□□□ -1.98
YPT52YKR014C SPT7P35177 1332 aa2.66□□□□□ -1.98
YPT52YKR014C OPI1P21957 404 aa2.65□□□□□ -1.99
YPT52YKR014C RXT2P38255 430 aa2.65□□□□□ -1.99
YPT52YKR014C STP2P38704 541 aa2.65□□□□□ -1.99
YPT52YKR014C GEP4P38812 185 aa2.65□□□□□ -1.99
YPT52YKR014C GPI16P38875 610 aa2.65□□□□□ -1.99
YPT52YKR014C SEC28P40509 296 aaKnown RBP2.65□□□□□ -1.99
YPT52YKR014C PAC11P40960 533 aa2.65□□□□□ -1.99
YPT52YKR014C YIP5P53108 310 aa2.65□□□□□ -1.99
YPT52YKR014C COS1P53822 381 aa2.65□□□□□ -1.99
YPT52YKR014C UAF30Q08747 228 aa2.65□□□□□ -1.99
YPT52YKR014C MEX67Q99257 599 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms