RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	ERG6	P25087	383 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	STE50	P25344	346 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SDH3	P33421	198 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SPT10	P35208	640 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SOL2	P37262	315 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SER3	P40054	469 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	LTP1	P40347	161 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	GVP36	P40531	326 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	IMA5	P40884	581 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	AIM24	P47127	394 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	IBA57	P47158	497 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SUN4	P53616	420 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SWS2	P53937	143 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	RUB1	Q03919	77 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	REX4	Q08237	289 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	GPB1	Q08886	897 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	GET4	Q12125	312 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	RIB2	Q12362	591 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	NUM1	Q00402	2748 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	AI4	P03878	556 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	LEU4	P06208	619 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	SPT3	P06844	337 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	FBA1	P14540	359 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	EXO70	P19658	623 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	BUB2	P26448	306 aa	Predicted RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	SPC29	P33419	253 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	RPS1A	P33442	255 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	GLG1	P36143	616 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	GIC1	P38785	314 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	YHR127W	P38833	243 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	TDA11	P38854	504 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SCS2	P40075	244 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	HIS6	P40545	261 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	LSM8	P47093	109 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	MSE1	P48525	536 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SAM37	P50110	327 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	YGR015C	P53208	328 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	NOP19	P53317	196 aa	Predicted RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	AAT1	Q01802	451 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	TRM82	Q03774	444 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	FMN1	Q03778	218 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	SNX41	Q04053	625 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	PEX12	Q04370	399 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	MRX10	Q05648	414 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	UIP4	Q08926	304 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	YLR049C	Q12110	428 aa		4.67	□□□□□ -1.66
DOA1	YKL213C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
DOA1	YKL213C	RPN5	Q12250	445 aa	Known RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	RRP42	Q12277	265 aa	Predicted RBP	4.67	□□□□□ -1.66
DOA1	YKL213C	PMR1	P13586	950 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	FUN26	P31381	517 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	COX13	P32799	129 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	SRP102	P36057	244 aa	Predicted RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	CDS1	P38221	457 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	INM1	P38710	295 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	SBE22	P38814	852 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	FKH2	P41813	862 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YJR149W	P47177	404 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	GCV1	P48015	400 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	MDM34	P53083	459 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	TYW3	P53177	273 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	MPP6	P53725	186 aa	Predicted RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	CUS2	P53830	285 aa	Predicted RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	ROT1	Q03691	256 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	ATC1	Q04005	294 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	RAD34	Q06665	692 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	SDO1	Q07953	250 aa	Known RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	ATG34	Q12292	412 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	GCN4	P03069	281 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	COS2	P0CX12	379 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	COS3	P0CX13	379 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	TEC1	P18412	486 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	ARG1	P22768	420 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	PPH21	P23594	369 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	RNA15	P25299	296 aa	Predicted RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	ERG3	P32353	365 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YBR238C	P38330	731 aa	Known RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
DOA1	YKL213C	ERV46	P39727	415 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	VHR1	P40522	640 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	GAB1	P41733	394 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	COS4	P43542	379 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	OTU1	P43558	301 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	FET5	P43561	622 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YJR030C	P47101	745 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	COS12	P53053	380 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YGL204C	P53089	101 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	ARI1	P53111	347 aa	Known RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	YNL260C	P53846	198 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YNL010W	P53981	241 aa	Known RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	CWC27	Q02770	301 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	OAZ1	Q02803	292 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YPL071C	Q02864	156 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	BNA7	Q04066	261 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YDR444W	Q04093	687 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YMR034C	Q05131	434 aa	Predicted RBP	4.66	□□□□□ -1.66
DOA1	YKL213C	COA4	Q05809	96 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	YLR173W	Q06247	608 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	PFA4	Q12006	378 aa		4.66	□□□□□ -1.66
DOA1	YKL213C	VAM3	Q12241	283 aa		4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms