RNA–Protein interactions for RNA: YJL189W

RPL39, Transcript of Ribosomal 60S subunit protein L39, yeast

Gene RPL39, Length 156 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL39	YJL189W	SRB2	P34162	210 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	ECM34	P38728	170 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	YPT35	P38815	214 aa	Known RBP	0.98	□□□□□ -2.25
RPL39	YJL189W	KEG1	P43614	200 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	COS5	P47187	383 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	PRM6	Q04705	352 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	COS7	Q07788	383 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	SRO7	Q12038	1033 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	YOL159C-A	Q3E769	90 aa		0.98	□□□□□ -2.25
RPL39	YJL189W	SRV2	P17555	526 aa	Known RBP	0.97	□□□□□ -2.25
RPL39	YJL189W	SAS3	P34218	831 aa		0.97	□□□□□ -2.25
RPL39	YJL189W	OTU2	P38747	307 aa	Known RBP	0.97	□□□□□ -2.25
RPL39	YJL189W	RRT13	P40042	185 aa		0.97	□□□□□ -2.25
RPL39	YJL189W	YIL059C	P40520	121 aa		0.97	□□□□□ -2.25
RPL39	YJL189W	YJR030C	P47101	745 aa		0.97	□□□□□ -2.25
RPL39	YJL189W	PRP38	Q00723	242 aa	Predicted RBP	0.97	□□□□□ -2.25
RPL39	YJL189W	RRP45	Q05636	305 aa	Known RBP	0.97	□□□□□ -2.25
RPL39	YJL189W	DDC1	Q08949	612 aa		0.97	□□□□□ -2.25
RPL39	YJL189W	HTZ1	Q12692	134 aa	Known RBP	0.97	□□□□□ -2.25
RPL39	YJL189W	POM152	P39685	1337 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	COX3	P00420	269 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	FUS3	P16892	353 aa	Known RBP	0.96	□□□□□ -2.26
RPL39	YJL189W	EPT1	P22140	391 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	ZIP1	P31111	875 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	DBP7	P36120	742 aa	Known RBP	0.96	□□□□□ -2.26
RPL39	YJL189W	FRM2	P37261	193 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	TRR2	P38816	342 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	GPI16	P38875	610 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	COS4	P43542	379 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	YGL138C	P53122	345 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	OCA2	P53949	197 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	MRX8	Q05473	314 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	COG4	Q06096	861 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	IMH1	Q06704	911 aa	Known RBP	0.96	□□□□□ -2.26
RPL39	YJL189W	YDL114W	Q07530	308 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	FLO11	P08640	1367 aa		0.96	□□□□□ -2.26
RPL39	YJL189W	RAD5	P32849	1169 aa	Predicted RBP	0.95	□□□□□ -2.26
RPL39	YJL189W	SDH4	P37298	181 aa		0.95	□□□□□ -2.26
RPL39	YJL189W	MMS4	P38257	691 aa		0.95	□□□□□ -2.26
RPL39	YJL189W	NTC20	P38302	140 aa	Predicted RBP	0.95	□□□□□ -2.26
RPL39	YJL189W	VAC7	P53950	1165 aa		0.95	□□□□□ -2.26
RPL39	YJL189W	SPR6	Q01684	191 aa		0.95	□□□□□ -2.26
RPL39	YJL189W	MMT1	Q03218	510 aa		0.95	□□□□□ -2.26
RPL39	YJL189W	INP2	Q03824	705 aa		0.95	□□□□□ -2.26
RPL39	YJL189W	ADE4	P04046	510 aa	Known RBP	0.94	□□□□□ -2.26
RPL39	YJL189W	ATP1	P07251	545 aa	Known RBP	0.94	□□□□□ -2.26
RPL39	YJL189W	GFD2	P25370	566 aa	Known RBP	0.94	□□□□□ -2.26
RPL39	YJL189W	YBR241C	P38142	488 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	GPX2	P38143	162 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	RMI1	Q02685	241 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	MSC3	Q05812	728 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	ASA1	Q06822	443 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	BUG1	Q12191	341 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	YAL067W-A	Q8TGK6	75 aa		0.94	□□□□□ -2.26
RPL39	YJL189W	RPS23A	P0CX29	145 aa	Known RBP	0.93	□□□□□ -2.26
RPL39	YJL189W	RPS23B	P0CX30	145 aa		0.93	□□□□□ -2.26
RPL39	YJL189W	ALG1	P16661	449 aa		0.93	□□□□□ -2.26
RPL39	YJL189W	DBF4	P32325	704 aa		0.93	□□□□□ -2.26
RPL39	YJL189W	YPS1	P32329	569 aa		0.93	□□□□□ -2.26
RPL39	YJL189W	SKG6	P32900	734 aa	Predicted RBP	0.93	□□□□□ -2.26
RPL39	YJL189W	SPO23	P33757	523 aa		0.93	□□□□□ -2.26
RPL39	YJL189W	YER079W	P40052	210 aa	Known RBP	0.93	□□□□□ -2.26
RPL39	YJL189W	ARF3	P40994	183 aa	RIP-Chip data	0.93	□□□□□ -2.26	not detected
RPL39	YJL189W	AIP1	P46680	615 aa	Known RBP	0.93	□□□□□ -2.26
RPL39	YJL189W	REX2	P54964	269 aa	Known RBP	0.93	□□□□□ -2.26
RPL39	YJL189W	ARX1	Q03862	593 aa	Known RBP	0.93	□□□□□ -2.26
RPL39	YJL189W	ROX1	P25042	368 aa		0.92	□□□□□ -2.26
RPL39	YJL189W	CHA1	P25379	360 aa	Known RBP	0.92	□□□□□ -2.26
RPL39	YJL189W	NIP1	P32497	812 aa	Known RBP	0.92	□□□□□ -2.26
RPL39	YJL189W	TOS2	P50078	622 aa		0.92	□□□□□ -2.26
RPL39	YJL189W	BIO3	P50277	480 aa		0.92	□□□□□ -2.26
RPL39	YJL189W	MIX17	Q03667	156 aa		0.92	□□□□□ -2.26
RPL39	YJL189W	RPS18A	P0CX55	146 aa	Known RBP	0.91	□□□□□ -2.26
RPL39	YJL189W	RPS18B	P0CX56	146 aa	Predicted RBP	0.91	□□□□□ -2.26
RPL39	YJL189W	DAL5	P15365	543 aa		0.91	□□□□□ -2.26
RPL39	YJL189W	URA4	P20051	364 aa		0.91	□□□□□ -2.26
RPL39	YJL189W	ANP1	P32629	500 aa		0.91	□□□□□ -2.26
RPL39	YJL189W	LSM12	P38828	187 aa	Known RBP	0.91	□□□□□ -2.26
RPL39	YJL189W	YGR117C	P53270	476 aa		0.91	□□□□□ -2.26
RPL39	YJL189W	MRX11	Q03079	207 aa		0.91	□□□□□ -2.26
RPL39	YJL189W	SVL3	Q03088	825 aa	Known RBP	0.91	□□□□□ -2.26
RPL39	YJL189W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.27	RIP-Chip
RPL39	YJL189W	DPB3	P27344	201 aa		0.9	□□□□□ -2.27
RPL39	YJL189W	TRF5	P48561	642 aa	Known RBP	0.9	□□□□□ -2.27
RPL39	YJL189W	SKO1	Q02100	647 aa		0.9	□□□□□ -2.27
RPL39	YJL189W	KAP120	Q02932	1032 aa		0.9	□□□□□ -2.27
RPL39	YJL189W	YDR131C	Q03899	556 aa		0.9	□□□□□ -2.27
RPL39	YJL189W	YDL211C	Q12121	372 aa		0.9	□□□□□ -2.27
RPL39	YJL189W	PCL9	Q12477	304 aa		0.9	□□□□□ -2.27
RPL39	YJL189W	DST1	P07273	309 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	CKA1	P15790	372 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	PHO84	P25297	587 aa	Known RBP	0.89	□□□□□ -2.27
RPL39	YJL189W	MKK1	P32490	508 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	YGP1	P38616	354 aa	Known RBP	0.89	□□□□□ -2.27
RPL39	YJL189W	GEP4	P38812	185 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	SCC4	P40090	624 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	MMF1	P40185	145 aa	Known RBP	0.89	□□□□□ -2.27
RPL39	YJL189W	CIN2	P46670	268 aa		0.89	□□□□□ -2.27
RPL39	YJL189W	CTK3	P46963	296 aa	Predicted RBP	0.89	□□□□□ -2.27
RPL39	YJL189W	ABM1	P47146	123 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms