RNA–Protein interactions for RNA: YJL010C

NOP9, Transcript of Essential subunit of U3-containing 90S preribosome, yeast

Gene NOP9, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP9	YJL010C	HSP104	P31539	908 aa	Known RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	YEF1	P32622	495 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	RAD5	P32849	1169 aa	Predicted RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	ASC1	P38011	319 aa	Known RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	GPI18	P38211	433 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	INM1	P38710	295 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	PTI1	P39927	425 aa	Predicted RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	TOM22	P49334	152 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	YGL262W	P53054	175 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	YGR111W	P53265	400 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	YGR117C	P53270	476 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	TRM112	P53738	135 aa	Predicted RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	PRP42	Q03776	544 aa	Known RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	RPN9	Q04062	393 aa	Known RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	GYL1	Q04322	720 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	YPR091C	Q06833	770 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	DNL4	Q08387	944 aa	Predicted RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	RUP1	Q12242	671 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	FOL3	Q12676	427 aa	Predicted RBP	0.87	□□□□□ -2.27
NOP9	YJL010C	SMC6	Q12749	1114 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	YBL111C	Q3E7Y5	667 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	FAB1	P34756	2278 aa		0.87	□□□□□ -2.27
NOP9	YJL010C	CCH1	P50077	2039 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	OPI3	P05375	206 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	TPK3	P05986	398 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	SSC1	P0CS90	654 aa	Known RBP	0.86	□□□□□ -2.27
NOP9	YJL010C	ALG1	P16661	449 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
NOP9	YJL010C	ZRC1	P20107	442 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	ANR2	P36090	516 aa	Predicted RBP	0.86	□□□□□ -2.27
NOP9	YJL010C	WSC4	P38739	605 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	GPI16	P38875	610 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	STN1	P38960	494 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	SEO1	P39709	593 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	ATM1	P40416	690 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	IGD1	P43598	195 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	YJL055W	P47044	245 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	YPS5	P53057	165 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	COS1	P53822	381 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	KTR6	P54070	446 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	YLR345W	Q06137	509 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	YLR456W	Q06199	204 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	DCI1	Q08558	271 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	FCY22	Q12119	530 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	ADH1	P00330	348 aa	Known RBP	0.86	□□□□□ -2.27
NOP9	YJL010C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
NOP9	YJL010C	PRB1	P09232	635 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	PHO91	P27514	894 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	0.86	□□□□□ -2.27	not detected
NOP9	YJL010C	SKT5	P34226	696 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	MPE1	P35728	441 aa	Known RBP	0.86	□□□□□ -2.27
NOP9	YJL010C	DOA1	P36037	715 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	GEP4	P38812	185 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	ROG1	P53118	685 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	CIK1	Q01649	594 aa		0.86	□□□□□ -2.27
NOP9	YJL010C	SKI8	Q02793	397 aa	Predicted RBP	0.86	□□□□□ -2.27
NOP9	YJL010C	CBP6	P07253	162 aa	Predicted RBP	0.85	□□□□□ -2.27
NOP9	YJL010C	CMK2	P22517	447 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	TIR2	P33890	251 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	MCR1	P36060	302 aa	Known RBP	0.85	□□□□□ -2.27
NOP9	YJL010C	GPX2	P38143	162 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	QDR3	P38227	689 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	SEC9	P40357	651 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	AIP1	P46680	615 aa	Known RBP	0.85	□□□□□ -2.27
NOP9	YJL010C	STE24	P47154	453 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	PGU1	P47180	361 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	TOS2	P50078	622 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	YIP5	P53108	310 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	FLC3	P53121	802 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	YGR018C	P53211	109 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	YPL107W	Q02873	248 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	ECM7	Q06200	448 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	IES4	Q08561	116 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	YOP1	Q12402	180 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	YDL199C	Q12407	687 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	PCL9	Q12477	304 aa		0.85	□□□□□ -2.27
NOP9	YJL010C	ARF1	P11076	181 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	DEP1	P31385	405 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	VMA8	P32610	256 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	YSC83	P32792	385 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	PEX5	P35056	612 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	SOL2	P37262	315 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	KAP104	P38217	918 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	YER184C	P39961	794 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	ALD5	P40047	520 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	PMT5	P52867	743 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	REX2	P54964	269 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	TPS1	Q00764	495 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	YDR341C	Q05506	607 aa	Known RBP	0.84	□□□□□ -2.27
NOP9	YJL010C	ASA1	Q06822	443 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	YDL114W	Q07530	308 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	NSE1	Q07913	336 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	UAF30	Q08747	228 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	GPM3	Q12326	303 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	RNH203	Q12338	110 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	HMS1	Q12398	434 aa		0.84	□□□□□ -2.27
NOP9	YJL010C	RPL12A	P0CX53	165 aa	Known RBP	0.84	□□□□□ -2.28
NOP9	YJL010C	RPL12B	P0CX54	165 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	GIT1	P25346	518 aa		0.84	□□□□□ -2.28
NOP9	YJL010C	FUN26	P31381	517 aa		0.84	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms