RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C APE2P32454 952 aaKnown RBP9.04□□□□□ -0.96
MET28YIR017C MDJ1P35191 511 aa9.04□□□□□ -0.96
MET28YIR017C MPM1P40364 252 aa9.04□□□□□ -0.96
MET28YIR017C MET28P40573 187 aa9.04□□□□□ -0.96
MET28YIR017C YJR141WP47172 347 aaPredicted RBP9.04□□□□□ -0.96
MET28YIR017C YJR142WP47173 342 aa9.04□□□□□ -0.96
MET28YIR017C YPL107WQ02873 248 aa9.04□□□□□ -0.96
MET28YIR017C PEX25Q02969 394 aa9.04□□□□□ -0.96
MET28YIR017C FRE7Q12333 620 aa9.04□□□□□ -0.96
MET28YIR017C YPT1P01123 206 aaKnown RBP9.03□□□□□ -0.96
MET28YIR017C CDC4P07834 779 aa9.03□□□□□ -0.96
MET28YIR017C SUI3P09064 285 aaKnown RBP9.03□□□□□ -0.96
MET28YIR017C YSF3P0C074 85 aaPredicted RBP9.03□□□□□ -0.96
MET28YIR017C SEC2P17065 759 aa9.03□□□□□ -0.96
MET28YIR017C THR1P17423 357 aaKnown RBP9.03□□□□□ -0.96
MET28YIR017C MCK1P21965 375 aaKnown RBP9.03□□□□□ -0.96
MET28YIR017C GPI12P23797 304 aa9.03□□□□□ -0.96
MET28YIR017C TOD6P34219 525 aa9.03□□□□□ -0.96
MET28YIR017C SPC42P36094 363 aa9.03□□□□□ -0.96
MET28YIR017C SLM4P38247 162 aa9.03□□□□□ -0.96
MET28YIR017C SNL1P40548 159 aa9.03□□□□□ -0.96
MET28YIR017C TPC1P53257 314 aa9.03□□□□□ -0.96
MET28YIR017C RSM10Q03201 203 aa9.03□□□□□ -0.96
MET28YIR017C YMR210WQ03649 449 aa9.03□□□□□ -0.96
MET28YIR017C YMR226CQ05016 267 aaKnown RBP9.03□□□□□ -0.96
MET28YIR017C ARO10Q06408 635 aa9.03□□□□□ -0.96
MET28YIR017C MMP1Q12372 583 aa9.03□□□□□ -0.96
MET28YIR017C MRX4Q12467 430 aa9.03□□□□□ -0.96
MET28YIR017C HCS1P34243 683 aa9.02□□□□□ -0.97
MET28YIR017C EXO84P38261 753 aa9.02□□□□□ -0.97
MET28YIR017C SNM1P40993 198 aa9.02□□□□□ -0.97
MET28YIR017C FAR7P43592 221 aa9.02□□□□□ -0.97
MET28YIR017C YGR067CP53243 804 aa9.02□□□□□ -0.97
MET28YIR017C MTQ1P53944 314 aa9.02□□□□□ -0.97
MET28YIR017C MEU1Q07938 337 aaKnown RBP RIP-Chip data9.02□□□□□ -0.97not detected
MET28YIR017C BDS1Q08347 646 aa9.02□□□□□ -0.97
MET28YIR017C YOR342CQ12182 319 aa9.02□□□□□ -0.97
MET28YIR017C YOR214CQ12282 236 aa9.02□□□□□ -0.97
MET28YIR017C RPS21BQ3E754 87 aaKnown RBP9.02□□□□□ -0.97
MET28YIR017C RPL20AP0CX23 172 aaKnown RBP9.01□□□□□ -0.97
MET28YIR017C RPL20BP0CX24 172 aaPredicted RBP9.01□□□□□ -0.97
MET28YIR017C ATR1P13090 542 aa9.01□□□□□ -0.97
MET28YIR017C PET9P18239 318 aaKnown RBP9.01□□□□□ -0.97
MET28YIR017C UBC8P28263 218 aa9.01□□□□□ -0.97
MET28YIR017C ORC2P32833 620 aa9.01□□□□□ -0.97
MET28YIR017C TOR1P35169 2470 aa9.01□□□□□ -0.97
MET28YIR017C MED8P38304 223 aa9.01□□□□□ -0.97
MET28YIR017C CUP9P41817 306 aa9.01□□□□□ -0.97
MET28YIR017C YFL066CP43538 392 aa9.01□□□□□ -0.97
MET28YIR017C YJR115WP47152 169 aa9.01□□□□□ -0.97
MET28YIR017C MAL11P53048 616 aa9.01□□□□□ -0.97
MET28YIR017C LCL3P53153 274 aa9.01□□□□□ -0.97
MET28YIR017C SWP1Q02795 286 aa9.01□□□□□ -0.97
MET28YIR017C SWA2Q06677 668 aa9.01□□□□□ -0.97
MET28YIR017C DTD1Q07648 150 aaKnown RBP9.01□□□□□ -0.97
MET28YIR017C PSF1Q12488 208 aa9.01□□□□□ -0.97
MET28YIR017C PBN1P25580 416 aa9□□□□□ -0.97
MET28YIR017C POL4P25615 582 aa9□□□□□ -0.97
MET28YIR017C ASF2P32448 525 aaPredicted RBP9□□□□□ -0.97
MET28YIR017C ALG3P38179 458 aa9□□□□□ -0.97
MET28YIR017C MDV1P47025 714 aa9□□□□□ -0.97
MET28YIR017C NUP57P48837 541 aa9□□□□□ -0.97
MET28YIR017C DCP2P53550 970 aaKnown RBP9□□□□□ -0.97
MET28YIR017C YLR460CP54007 376 aa9□□□□□ -0.97
MET28YIR017C URC2Q04411 772 aa9□□□□□ -0.97
MET28YIR017C ENT2Q05785 613 aa9□□□□□ -0.97
MET28YIR017C MDM30Q05930 598 aa9□□□□□ -0.97
MET28YIR017C LOT6Q07923 191 aa9□□□□□ -0.97
MET28YIR017C AKR2Q12013 749 aa9□□□□□ -0.97
MET28YIR017C TPO4Q12256 659 aa9□□□□□ -0.97
MET28YIR017C PAR32Q12515 295 aaKnown RBP9□□□□□ -0.97
MET28YIR017C TEL1P38110 2787 aa8.99□□□□□ -0.97
MET28YIR017C LDB16P25587 256 aa8.99□□□□□ -0.97
MET28YIR017C RPN2P32565 945 aaKnown RBP8.99□□□□□ -0.97
MET28YIR017C MRPL6P32904 214 aa8.99□□□□□ -0.97
MET28YIR017C RCY1P39531 840 aa8.99□□□□□ -0.97
MET28YIR017C YAR028WP39548 234 aa8.99□□□□□ -0.97
MET28YIR017C BAP3P41815 604 aa8.99□□□□□ -0.97
MET28YIR017C DBP6P53734 629 aaKnown RBP8.99□□□□□ -0.97
MET28YIR017C TPS1Q00764 495 aaKnown RBP8.99□□□□□ -0.97
MET28YIR017C YPR097WQ06839 1073 aa8.99□□□□□ -0.97
MET28YIR017C YCK1P23291 538 aa8.98□□□□□ -0.97
MET28YIR017C STP22P25604 385 aa8.98□□□□□ -0.97
MET28YIR017C IDH1P28834 360 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
MET28YIR017C GSH1P32477 678 aa8.98□□□□□ -0.97
MET28YIR017C PEP12P32854 288 aa8.98□□□□□ -0.97
MET28YIR017C ANS1P38832 159 aa8.98□□□□□ -0.97
MET28YIR017C PZF1P39933 429 aa8.98□□□□□ -0.97
MET28YIR017C YIL067CP40514 678 aa8.98□□□□□ -0.97
MET28YIR017C SMK1P41808 388 aa8.98□□□□□ -0.97
MET28YIR017C SHR5P41912 237 aa8.98□□□□□ -0.97
MET28YIR017C SNO3P43544 222 aa8.98□□□□□ -0.97
MET28YIR017C CAK1P43568 368 aaPredicted RBP8.98□□□□□ -0.97
MET28YIR017C MPC1P53157 130 aaKnown RBP8.98□□□□□ -0.97
MET28YIR017C YGR168CP53293 376 aa8.98□□□□□ -0.97
MET28YIR017C VPS36Q06696 566 aa8.98□□□□□ -0.97
MET28YIR017C YPL066WQ12194 479 aa8.98□□□□□ -0.97
MET28YIR017C HSP42Q12329 375 aa8.98□□□□□ -0.97
MET28YIR017C AI1P03875 834 aa8.97□□□□□ -0.97
MET28YIR017C MOD5P07884 428 aa8.97□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms