RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W NRP1P32770 719 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
PDE1YGL248W SPT10P35208 640 aa5.02□□□□□ -1.61
PDE1YGL248W YKL063CP35725 167 aa5.02□□□□□ -1.61
PDE1YGL248W YPK3P38070 525 aa5.02□□□□□ -1.61
PDE1YGL248W RFC5P38251 354 aa5.02□□□□□ -1.61
PDE1YGL248W ICS2P38284 255 aa5.02□□□□□ -1.61
PDE1YGL248W VHC1P38329 1120 aa5.02□□□□□ -1.61
PDE1YGL248W URA8P38627 578 aaPredicted RBP5.02□□□□□ -1.61
PDE1YGL248W HIS2P38635 335 aa5.02□□□□□ -1.61
PDE1YGL248W ARO9P38840 513 aaPredicted RBP5.02□□□□□ -1.61
PDE1YGL248W CTF8P38877 133 aa5.02□□□□□ -1.61
PDE1YGL248W SEO1P39709 593 aa5.02□□□□□ -1.61
PDE1YGL248W PAC11P40960 533 aa5.02□□□□□ -1.61
PDE1YGL248W PTR3P43606 678 aa5.02□□□□□ -1.61
PDE1YGL248W IRC7P43623 340 aa5.02□□□□□ -1.61
PDE1YGL248W ALB1P47019 175 aaPredicted RBP5.02□□□□□ -1.61
PDE1YGL248W TAX4P47030 604 aa5.02□□□□□ -1.61
PDE1YGL248W SSN8P47821 323 aa5.02□□□□□ -1.61
PDE1YGL248W STB4P50104 949 aa5.02□□□□□ -1.61
PDE1YGL248W NSA1P53136 463 aaPredicted RBP5.02□□□□□ -1.61
PDE1YGL248W FYV6P53913 173 aa5.02□□□□□ -1.61
PDE1YGL248W MMT1Q03218 510 aa5.02□□□□□ -1.61
PDE1YGL248W SLD5Q03406 294 aa5.02□□□□□ -1.61
PDE1YGL248W USA1Q03714 838 aa5.02□□□□□ -1.61
PDE1YGL248W RVB1Q03940 463 aaKnown RBP5.02□□□□□ -1.61
PDE1YGL248W BUR2Q05949 395 aa5.02□□□□□ -1.61
PDE1YGL248W AAD15Q08361 143 aa5.02□□□□□ -1.61
PDE1YGL248W DIA2Q08496 732 aaPredicted RBP5.02□□□□□ -1.61
PDE1YGL248W ACF2Q12168 779 aa5.02□□□□□ -1.61
PDE1YGL248W PRS5Q12265 496 aaKnown RBP5.02□□□□□ -1.61
PDE1YGL248W ADH2P00331 348 aaKnown RBP5.01□□□□□ -1.61
PDE1YGL248W HIS5P07172 385 aa5.01□□□□□ -1.61
PDE1YGL248W YMR31P19955 123 aa5.01□□□□□ -1.61
PDE1YGL248W CTR86P25355 563 aa5.01□□□□□ -1.61
PDE1YGL248W RFA2P26754 273 aaKnown RBP5.01□□□□□ -1.61
PDE1YGL248W UTP11P34247 250 aaPredicted RBP5.01□□□□□ -1.61
PDE1YGL248W YBR259WP38338 688 aa5.01□□□□□ -1.61
PDE1YGL248W IMD2P38697 523 aaKnown RBP5.01□□□□□ -1.61
PDE1YGL248W GPI16P38875 610 aa5.01□□□□□ -1.61
PDE1YGL248W UIP3P39547 235 aa5.01□□□□□ -1.61
PDE1YGL248W YNL194CP40169 301 aa5.01□□□□□ -1.61
PDE1YGL248W BTT1P40314 149 aaPredicted RBP5.01□□□□□ -1.61
PDE1YGL248W YKE4P40544 346 aa5.01□□□□□ -1.61
PDE1YGL248W OPT1P40897 799 aa5.01□□□□□ -1.61
PDE1YGL248W PFA3P42836 336 aa5.01□□□□□ -1.61
PDE1YGL248W SWP82P43554 623 aa5.01□□□□□ -1.61
PDE1YGL248W RPC17P47076 161 aa5.01□□□□□ -1.61
PDE1YGL248W YJR056CP47115 236 aa5.01□□□□□ -1.61
PDE1YGL248W CWC23P52868 283 aaPredicted RBP5.01□□□□□ -1.61
PDE1YGL248W PKP2P53170 491 aa5.01□□□□□ -1.61
PDE1YGL248W YNL140CP53910 189 aa5.01□□□□□ -1.61
PDE1YGL248W MTQ1P53944 314 aa5.01□□□□□ -1.61
PDE1YGL248W PRP38Q00723 242 aaPredicted RBP5.01□□□□□ -1.61
PDE1YGL248W APM1Q00776 475 aaPredicted RBP5.01□□□□□ -1.61
PDE1YGL248W HOF1Q05080 669 aa5.01□□□□□ -1.61
PDE1YGL248W PEX10Q05568 337 aa5.01□□□□□ -1.61
PDE1YGL248W SIA1Q12212 622 aa5.01□□□□□ -1.61
PDE1YGL248W ZPS1Q12512 249 aa5.01□□□□□ -1.61
PDE1YGL248W YKL183C-AQ3E765 70 aa5.01□□□□□ -1.61
PDE1YGL248W RGS2Q99188 309 aa5.01□□□□□ -1.61
PDE1YGL248W PGK1P00560 416 aaKnown RBP5□□□□□ -1.61
PDE1YGL248W NFT1P0CE68 1218 aa5□□□□□ -1.61
PDE1YGL248W RPS24AP0CX31 135 aaKnown RBP5□□□□□ -1.61
PDE1YGL248W RPS24BP0CX32 135 aaKnown RBP5□□□□□ -1.61
PDE1YGL248W POX1P13711 748 aa5□□□□□ -1.61
PDE1YGL248W DBR1P24309 405 aaKnown RBP5□□□□□ -1.61
PDE1YGL248W YSC83P32792 385 aa5□□□□□ -1.61
PDE1YGL248W CDC13P32797 924 aaKnown RBP5□□□□□ -1.61
PDE1YGL248W PDR3P33200 976 aa5□□□□□ -1.61
PDE1YGL248W TRM2P33753 639 aa5□□□□□ -1.61
PDE1YGL248W NTR2P36118 322 aaPredicted RBP5□□□□□ -1.61
PDE1YGL248W QDR3P38227 689 aa5□□□□□ -1.61
PDE1YGL248W LNP1P38878 278 aa5□□□□□ -1.61
PDE1YGL248W ECM1P39715 212 aa5□□□□□ -1.61
PDE1YGL248W LCP5P40079 357 aaPredicted RBP5□□□□□ -1.61
PDE1YGL248W YER137CP40083 148 aaKnown RBP5□□□□□ -1.61
PDE1YGL248W SNG1P46950 547 aa5□□□□□ -1.61
PDE1YGL248W MDV1P47025 714 aa5□□□□□ -1.61
PDE1YGL248W YDL186WP48568 277 aa5□□□□□ -1.61
PDE1YGL248W IST1P53843 298 aaPredicted RBP5□□□□□ -1.61
PDE1YGL248W RMI1Q02685 241 aa5□□□□□ -1.61
PDE1YGL248W UBX2Q04228 584 aa5□□□□□ -1.61
PDE1YGL248W COQ11Q05892 277 aa5□□□□□ -1.61
PDE1YGL248W ARR3Q06598 404 aa5□□□□□ -1.61
PDE1YGL248W CYK3Q07533 885 aa5□□□□□ -1.61
PDE1YGL248W AFT2Q08957 416 aa5□□□□□ -1.61
PDE1YGL248W MRH1Q12117 320 aaPredicted RBP5□□□□□ -1.61
PDE1YGL248W YCL012CQ8J0M4 134 aa5□□□□□ -1.61
PDE1YGL248W CLN3P13365 580 aa4.99□□□□□ -1.61
PDE1YGL248W CBS2P14905 389 aa4.99□□□□□ -1.61
PDE1YGL248W RPO26P20435 155 aa4.99□□□□□ -1.61
PDE1YGL248W CKI1P20485 582 aa4.99□□□□□ -1.61
PDE1YGL248W CDC20P26309 610 aa4.99□□□□□ -1.61
PDE1YGL248W MSK1P32048 576 aa4.99□□□□□ -1.61
PDE1YGL248W VPH2P32341 215 aa4.99□□□□□ -1.61
PDE1YGL248W TAF14P35189 244 aa4.99□□□□□ -1.61
PDE1YGL248W AAP1P37898 856 aaKnown RBP4.99□□□□□ -1.61
PDE1YGL248W DER1P38307 211 aa4.99□□□□□ -1.61
PDE1YGL248W PCF11P39081 626 aaPredicted RBP4.99□□□□□ -1.61
PDE1YGL248W FRT2P39734 528 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms