RNA–Protein interactions for RNA: YGL129C

RSM23, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM23, Length 1,353 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM23	YGL129C	SPE3	Q12074	293 aa	Known RBP	4.3	□□□□□ -1.72
RSM23	YGL129C	CEX1	Q12453	761 aa		4.3	□□□□□ -1.72
RSM23	YGL129C	YDL012C	Q12489	107 aa		4.3	□□□□□ -1.72
RSM23	YGL129C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
RSM23	YGL129C	RPL12A	P0CX53	165 aa	Known RBP	4.29	□□□□□ -1.72
RSM23	YGL129C	RPL12B	P0CX54	165 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	TOA2	P32774	122 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	EFM4	P40516	257 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	ABM1	P47146	123 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	YET2	Q04210	160 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	GYL1	Q04322	720 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	LIP2	Q06005	328 aa		4.29	□□□□□ -1.72
RSM23	YGL129C	PHO91	P27514	894 aa		4.28	□□□□□ -1.72
RSM23	YGL129C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
RSM23	YGL129C	RRP46	P53256	223 aa	Predicted RBP	4.28	□□□□□ -1.72
RSM23	YGL129C	CIK1	Q01649	594 aa		4.28	□□□□□ -1.72
RSM23	YGL129C	NDL1	Q06568	189 aa		4.28	□□□□□ -1.72
RSM23	YGL129C	YER186C	P40101	306 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	LCB2	P40970	561 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	SPR6	Q01684	191 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	URC2	Q04411	772 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	NOP6	Q07623	225 aa	Known RBP	4.27	□□□□□ -1.73
RSM23	YGL129C	RPN5	Q12250	445 aa	Known RBP	4.27	□□□□□ -1.73
RSM23	YGL129C	DFG10	P40526	253 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	HAC1	P41546	238 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	RSC1	P53236	928 aa		4.27	□□□□□ -1.73
RSM23	YGL129C	PIS1	P06197	220 aa	Known RBP	4.26	□□□□□ -1.73
RSM23	YGL129C	RPL1A	P0CX43	217 aa	Known RBP	4.26	□□□□□ -1.73
RSM23	YGL129C	RPL1B	P0CX44	217 aa	Known RBP	4.26	□□□□□ -1.73
RSM23	YGL129C	COX13	P32799	129 aa		4.26	□□□□□ -1.73
RSM23	YGL129C	PRP3	Q03338	469 aa	Predicted RBP	4.26	□□□□□ -1.73
RSM23	YGL129C	ASA1	Q06822	443 aa		4.26	□□□□□ -1.73
RSM23	YGL129C	LOT6	Q07923	191 aa		4.26	□□□□□ -1.73
RSM23	YGL129C	NAG1	Q8TGN9	163 aa		4.26	□□□□□ -1.73
RSM23	YGL129C	PRR1	P28708	518 aa		4.25	□□□□□ -1.73
RSM23	YGL129C	SKT5	P34226	696 aa		4.25	□□□□□ -1.73
RSM23	YGL129C	MCR1	P36060	302 aa	Known RBP	4.25	□□□□□ -1.73
RSM23	YGL129C	OM14	P38325	134 aa		4.25	□□□□□ -1.73
RSM23	YGL129C	ALD5	P40047	520 aa	Known RBP	4.25	□□□□□ -1.73
RSM23	YGL129C	MAM33	P40513	266 aa		4.25	□□□□□ -1.73
RSM23	YGL129C	YPR091C	Q06833	770 aa		4.25	□□□□□ -1.73
RSM23	YGL129C	DNL4	Q08387	944 aa	Predicted RBP	4.25	□□□□□ -1.73
RSM23	YGL129C	YOP1	Q12402	180 aa		4.25	□□□□□ -1.73
RSM23	YGL129C	PXA2	P34230	853 aa		4.24	□□□□□ -1.73
RSM23	YGL129C	MLH1	P38920	769 aa		4.24	□□□□□ -1.73
RSM23	YGL129C	ATM1	P40416	690 aa		4.24	□□□□□ -1.73
RSM23	YGL129C	FCY22	Q12119	530 aa		4.24	□□□□□ -1.73
RSM23	YGL129C	COX4	P04037	155 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	TPK3	P05986	398 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	PDE2	P06776	526 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	SLM5	P25345	492 aa	Known RBP	4.23	□□□□□ -1.73
RSM23	YGL129C	CDC50	P25656	391 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	FUN26	P31381	517 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	PAC11	P40960	533 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	SKI8	Q02793	397 aa	Predicted RBP	4.23	□□□□□ -1.73
RSM23	YGL129C	PRM6	Q04705	352 aa		4.23	□□□□□ -1.73
RSM23	YGL129C	YHC1	Q05900	231 aa	Known RBP	4.23	□□□□□ -1.73
RSM23	YGL129C	LRP1	P38801	184 aa	Known RBP	4.22	□□□□□ -1.73
RSM23	YGL129C	YHR177W	P38867	453 aa		4.22	□□□□□ -1.73
RSM23	YGL129C	TIM17	P39515	158 aa		4.22	□□□□□ -1.73
RSM23	YGL129C	CLD1	P53264	445 aa		4.22	□□□□□ -1.73
RSM23	YGL129C	MRPS16	Q02608	121 aa		4.22	□□□□□ -1.73
RSM23	YGL129C	YDR541C	Q03049	344 aa		4.22	□□□□□ -1.73
RSM23	YGL129C	YDL114W	Q07530	308 aa		4.22	□□□□□ -1.73
RSM23	YGL129C	PRB1	P09232	635 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	IES6	P32617	166 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	TIR2	P33890	251 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	PFF1	P38244	976 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	HEM14	P40012	539 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	KEG1	P43614	200 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	YGR018C	P53211	109 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	MCT1	Q12283	360 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	YDL199C	Q12407	687 aa		4.21	□□□□□ -1.74
RSM23	YGL129C	CHA1	P25379	360 aa	Known RBP	4.2	□□□□□ -1.74
RSM23	YGL129C	PFS1	P38872	237 aa		4.2	□□□□□ -1.74
RSM23	YGL129C	MNL1	P38888	796 aa		4.2	□□□□□ -1.74
RSM23	YGL129C	RTT102	P53330	157 aa		4.2	□□□□□ -1.74
RSM23	YGL129C	PAR32	Q12515	295 aa	Known RBP	4.2	□□□□□ -1.74
RSM23	YGL129C	ARF1	P11076	181 aa	Known RBP	4.19	□□□□□ -1.74
RSM23	YGL129C	GEP4	P38812	185 aa		4.19	□□□□□ -1.74
RSM23	YGL129C	SEO1	P39709	593 aa		4.19	□□□□□ -1.74
RSM23	YGL129C	YNL208W	P40159	199 aa	Known RBP	4.19	□□□□□ -1.74
RSM23	YGL129C	ERP4	Q12450	207 aa		4.19	□□□□□ -1.74
RSM23	YGL129C	RNA1	P11745	407 aa	Known RBP	4.18	□□□□□ -1.74
RSM23	YGL129C	RAD5	P32849	1169 aa	Predicted RBP	4.18	□□□□□ -1.74
RSM23	YGL129C	SPO23	P33757	523 aa		4.18	□□□□□ -1.74
RSM23	YGL129C	DOA1	P36037	715 aa		4.18	□□□□□ -1.74
RSM23	YGL129C	SPP381	P38282	291 aa	Predicted RBP	4.18	□□□□□ -1.74
RSM23	YGL129C	YIP5	P53108	310 aa		4.18	□□□□□ -1.74
RSM23	YGL129C	ADH1	P00330	348 aa	Known RBP	4.17	□□□□□ -1.74
RSM23	YGL129C	MNE1	P24720	663 aa		4.17	□□□□□ -1.74
RSM23	YGL129C	RRP7	P25368	297 aa	Predicted RBP	4.17	□□□□□ -1.74
RSM23	YGL129C	LDS2	Q08218	356 aa		4.17	□□□□□ -1.74
RSM23	YGL129C	MID2	P36027	376 aa		4.16	□□□□□ -1.74
RSM23	YGL129C	ECM8	P38246	354 aa		4.16	□□□□□ -1.74
RSM23	YGL129C	YJL055W	P47044	245 aa		4.16	□□□□□ -1.74
RSM23	YGL129C	YPS5	P53057	165 aa		4.16	□□□□□ -1.74
RSM23	YGL129C	TRM112	P53738	135 aa	Predicted RBP	4.16	□□□□□ -1.74
RSM23	YGL129C	IPK1	Q06667	281 aa		4.16	□□□□□ -1.74
RSM23	YGL129C	GAT3	Q07928	141 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms