RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C RRN9P53437 365 aa3.98□□□□□ -1.77
SCL1YGL011C RPL6AQ02326 176 aaKnown RBP3.98□□□□□ -1.77
SCL1YGL011C YFH1Q07540 174 aa3.98□□□□□ -1.77
SCL1YGL011C SRN2Q99176 213 aa3.98□□□□□ -1.77
SCL1YGL011C PAB1P04147 577 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77 RIP-Chip
SCL1YGL011C SUP35P05453 685 aaKnown RBP3.97□□□□□ -1.77
SCL1YGL011C ARF1P11076 181 aaKnown RBP3.97□□□□□ -1.77
SCL1YGL011C TOA2P32774 122 aa3.97□□□□□ -1.77
SCL1YGL011C YHR131CP38835 850 aa3.97□□□□□ -1.77
SCL1YGL011C MTQ1P53944 314 aa3.97□□□□□ -1.77
SCL1YGL011C AAD15Q08361 143 aa3.97□□□□□ -1.77
SCL1YGL011C YOP1Q12402 180 aa3.97□□□□□ -1.77
SCL1YGL011C TFB5Q3E7C1 72 aaPredicted RBP3.97□□□□□ -1.77
SCL1YGL011C SCH9P11792 824 aaKnown RBP3.96□□□□□ -1.78
SCL1YGL011C GPX2P38143 162 aa3.96□□□□□ -1.78
SCL1YGL011C YHK8P38776 514 aa3.96□□□□□ -1.78
SCL1YGL011C TDA1Q03533 586 aa3.96□□□□□ -1.78
SCL1YGL011C RBD2Q12270 262 aa3.96□□□□□ -1.78
SCL1YGL011C YCR024C-BQ3E7Z8 88 aa3.96□□□□□ -1.78
SCL1YGL011C SPT7P35177 1332 aa3.95□□□□□ -1.78
SCL1YGL011C RNA1P11745 407 aaKnown RBP3.95□□□□□ -1.78
SCL1YGL011C YEL045CP32616 141 aa3.95□□□□□ -1.78
SCL1YGL011C MCR1P36060 302 aaKnown RBP3.95□□□□□ -1.78
SCL1YGL011C LAS1P36146 502 aaPredicted RBP3.95□□□□□ -1.78
SCL1YGL011C DAD2P36162 133 aa3.95□□□□□ -1.78
SCL1YGL011C ABM1P47146 123 aa3.95□□□□□ -1.78
SCL1YGL011C IRC25Q07951 179 aa3.95□□□□□ -1.78
SCL1YGL011C LDS2Q08218 356 aa3.95□□□□□ -1.78
SCL1YGL011C SMF3Q12078 473 aaPredicted RBP3.95□□□□□ -1.78
SCL1YGL011C YGK3Q12222 375 aaPredicted RBP3.95□□□□□ -1.78
SCL1YGL011C EAF3Q12432 401 aa3.95□□□□□ -1.78
SCL1YGL011C IZH2Q12442 317 aa3.95□□□□□ -1.78
SCL1YGL011C REV1P12689 985 aa3.94□□□□□ -1.78
SCL1YGL011C RVS161P25343 265 aaKnown RBP3.94□□□□□ -1.78
SCL1YGL011C POT1P27796 417 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SCL1YGL011C MRPL10P36520 322 aa3.94□□□□□ -1.78
SCL1YGL011C YMR102CQ03177 834 aa3.94□□□□□ -1.78
SCL1YGL011C RTN1Q04947 295 aaKnown RBP3.94□□□□□ -1.78
SCL1YGL011C RIF2Q06208 395 aa3.94□□□□□ -1.78
SCL1YGL011C MSI1P13712 422 aa3.93□□□□□ -1.78
SCL1YGL011C OPI1P21957 404 aa3.93□□□□□ -1.78
SCL1YGL011C PHO84P25297 587 aaKnown RBP3.93□□□□□ -1.78
SCL1YGL011C PSO2P30620 661 aa3.93□□□□□ -1.78
SCL1YGL011C FAA1P30624 700 aaKnown RBP3.93□□□□□ -1.78
SCL1YGL011C GDT1P38301 280 aaPredicted RBP3.93□□□□□ -1.78
SCL1YGL011C GEP4P38812 185 aa3.93□□□□□ -1.78
SCL1YGL011C AIM24P47127 394 aa3.93□□□□□ -1.78
SCL1YGL011C SMC5Q08204 1093 aa3.93□□□□□ -1.78
SCL1YGL011C PIS1P06197 220 aaKnown RBP3.92□□□□□ -1.78
SCL1YGL011C UBA1P22515 1024 aaKnown RBP3.92□□□□□ -1.78
SCL1YGL011C SIF2P38262 535 aa3.92□□□□□ -1.78
SCL1YGL011C SDS24P38314 527 aa3.92□□□□□ -1.78
SCL1YGL011C AIM10P39965 576 aaKnown RBP3.92□□□□□ -1.78
SCL1YGL011C PRE5P40302 234 aaKnown RBP3.92□□□□□ -1.78
SCL1YGL011C EGT2P42835 1041 aa3.92□□□□□ -1.78
SCL1YGL011C ADA2Q02336 434 aa3.92□□□□□ -1.78
SCL1YGL011C UTP6Q02354 440 aaKnown RBP3.92□□□□□ -1.78
SCL1YGL011C YPR078CQ06813 372 aa3.92□□□□□ -1.78
SCL1YGL011C LOT6Q07923 191 aa3.92□□□□□ -1.78
SCL1YGL011C SFG1Q12507 346 aa3.92□□□□□ -1.78
SCL1YGL011C TIR2P33890 251 aa3.91□□□□□ -1.78
SCL1YGL011C MAM33P40513 266 aa3.91□□□□□ -1.78
SCL1YGL011C HAC1P41546 238 aa3.91□□□□□ -1.78
SCL1YGL011C MST27P53176 234 aa3.91□□□□□ -1.78
SCL1YGL011C YGR016WP53209 190 aa3.91□□□□□ -1.78
SCL1YGL011C TRM112P53738 135 aaPredicted RBP3.91□□□□□ -1.78
SCL1YGL011C YNR068CP53754 272 aa3.91□□□□□ -1.78
SCL1YGL011C PRM6Q04705 352 aa3.91□□□□□ -1.78
SCL1YGL011C DBP9Q06218 594 aaKnown RBP3.91□□□□□ -1.78
SCL1YGL011C TMC1Q08422 150 aaPredicted RBP3.91□□□□□ -1.78
SCL1YGL011C PEX27Q08580 376 aa3.91□□□□□ -1.78
SCL1YGL011C PTI1P39927 425 aaPredicted RBP3.9□□□□□ -1.79
SCL1YGL011C BIR1P47134 954 aa3.9□□□□□ -1.79
SCL1YGL011C BNS1P50084 137 aa3.9□□□□□ -1.79
SCL1YGL011C SDT1P53078 280 aa3.9□□□□□ -1.79
SCL1YGL011C ALF1P53904 254 aa3.9□□□□□ -1.79
SCL1YGL011C PAL1Q05518 499 aaKnown RBP3.9□□□□□ -1.79
SCL1YGL011C YDR286CQ05530 114 aa3.9□□□□□ -1.79
SCL1YGL011C MHR1Q06630 226 aa3.9□□□□□ -1.79
SCL1YGL011C MFG1Q07684 458 aa3.9□□□□□ -1.79
SCL1YGL011C JID1Q12350 301 aa3.9□□□□□ -1.79
SCL1YGL011C LDB16P25587 256 aa3.89□□□□□ -1.79
SCL1YGL011C HXT1P32465 570 aa3.89□□□□□ -1.79
SCL1YGL011C SPT10P35208 640 aa3.89□□□□□ -1.79
SCL1YGL011C YFR057WP43625 151 aa3.89□□□□□ -1.79
SCL1YGL011C YNL143CP53908 130 aa3.89□□□□□ -1.79
SCL1YGL011C YPR091CQ06833 770 aa3.89□□□□□ -1.79
SCL1YGL011C GAT3Q07928 141 aa3.89□□□□□ -1.79
SCL1YGL011C PML1Q07930 204 aaPredicted RBP3.89□□□□□ -1.79
SCL1YGL011C PLP2Q12017 286 aa3.89□□□□□ -1.79
SCL1YGL011C YOR012WQ12351 137 aa3.89□□□□□ -1.79
SCL1YGL011C WTM1Q12363 437 aaKnown RBP3.89□□□□□ -1.79
SCL1YGL011C RPB5P20434 215 aa3.88□□□□□ -1.79
SCL1YGL011C DBR1P24309 405 aaKnown RBP3.88□□□□□ -1.79
SCL1YGL011C RAD5P32849 1169 aaPredicted RBP3.88□□□□□ -1.79
SCL1YGL011C PTK1P36002 662 aaPredicted RBP3.88□□□□□ -1.79
SCL1YGL011C ECM8P38246 354 aa3.88□□□□□ -1.79
SCL1YGL011C RTC2P38279 296 aa3.88□□□□□ -1.79
SCL1YGL011C CAJ1P39101 391 aa3.88□□□□□ -1.79
SCL1YGL011C MIG3P39943 394 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms