RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W YAP3P38749 330 aa3.89□□□□□ -1.79
UBP6YFR010W GPI16P38875 610 aa3.89□□□□□ -1.79
UBP6YFR010W LNP1P38878 278 aa3.89□□□□□ -1.79
UBP6YFR010W EDC3P39998 551 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W VAB2P40003 282 aa3.89□□□□□ -1.79
UBP6YFR010W YER137CP40083 148 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W BUR6P40096 142 aa3.89□□□□□ -1.79
UBP6YFR010W JLP2P40206 208 aa3.89□□□□□ -1.79
UBP6YFR010W RTT101P47050 842 aa3.89□□□□□ -1.79
UBP6YFR010W YDL186WP48568 277 aa3.89□□□□□ -1.79
UBP6YFR010W AMA1P50082 593 aa3.89□□□□□ -1.79
UBP6YFR010W YAT1P80235 687 aa3.89□□□□□ -1.79
UBP6YFR010W KRE28Q04431 385 aa3.89□□□□□ -1.79
UBP6YFR010W SYO1Q07395 620 aa3.89□□□□□ -1.79
UBP6YFR010W AAD15Q08361 143 aa3.89□□□□□ -1.79
UBP6YFR010W PEX27Q08580 376 aa3.89□□□□□ -1.79
UBP6YFR010W SLF1Q12034 447 aaKnown RBP3.89□□□□□ -1.79
UBP6YFR010W RMD5Q12508 421 aa3.89□□□□□ -1.79
UBP6YFR010W YKL183C-AQ3E765 70 aa3.89□□□□□ -1.79
UBP6YFR010W HTB1P02293 131 aaKnown RBP3.88□□□□□ -1.79
UBP6YFR010W HTB2P02294 131 aa3.88□□□□□ -1.79
UBP6YFR010W YMR085WP0CF18 432 aa3.88□□□□□ -1.79
UBP6YFR010W RPO26P20435 155 aa3.88□□□□□ -1.79
UBP6YFR010W DBR1P24309 405 aaKnown RBP3.88□□□□□ -1.79
UBP6YFR010W PUP3P25451 205 aaKnown RBP3.88□□□□□ -1.79
UBP6YFR010W ERG9P29704 444 aa3.88□□□□□ -1.79
UBP6YFR010W IMD2P38697 523 aaKnown RBP3.88□□□□□ -1.79
UBP6YFR010W DIA4P38705 446 aaPredicted RBP3.88□□□□□ -1.79
UBP6YFR010W YER130CP39959 443 aa3.88□□□□□ -1.79
UBP6YFR010W YNL194CP40169 301 aa3.88□□□□□ -1.79
UBP6YFR010W SWP82P43554 623 aa3.88□□□□□ -1.79
UBP6YFR010W FAR3P46671 204 aa3.88□□□□□ -1.79
UBP6YFR010W MRX5P47007 382 aa3.88□□□□□ -1.79
UBP6YFR010W YJR149WP47177 404 aa3.88□□□□□ -1.79
UBP6YFR010W IMO32P53219 342 aa3.88□□□□□ -1.79
UBP6YFR010W ERG5P54781 538 aa3.88□□□□□ -1.79
UBP6YFR010W PRP38Q00723 242 aaPredicted RBP3.88□□□□□ -1.79
UBP6YFR010W HOF1Q05080 669 aa3.88□□□□□ -1.79
UBP6YFR010W POS5Q06892 414 aa3.88□□□□□ -1.79
UBP6YFR010W PGK1P00560 416 aaKnown RBP3.87□□□□□ -1.79
UBP6YFR010W CBS2P14905 389 aa3.87□□□□□ -1.79
UBP6YFR010W RNR3P21672 869 aaKnown RBP3.87□□□□□ -1.79
UBP6YFR010W DAL82P21705 255 aa3.87□□□□□ -1.79
UBP6YFR010W ELO2P25358 347 aa3.87□□□□□ -1.79
UBP6YFR010W RFA2P26754 273 aaKnown RBP3.87□□□□□ -1.79
UBP6YFR010W ZUO1P32527 433 aaKnown RBP3.87□□□□□ -1.79
UBP6YFR010W MNS1P32906 549 aa3.87□□□□□ -1.79
UBP6YFR010W PDR3P33200 976 aa3.87□□□□□ -1.79
UBP6YFR010W FZO1P38297 855 aa3.87□□□□□ -1.79
UBP6YFR010W SPC97P38863 823 aa3.87□□□□□ -1.79
UBP6YFR010W YHR177WP38867 453 aa3.87□□□□□ -1.79
UBP6YFR010W TAX4P47030 604 aa3.87□□□□□ -1.79
UBP6YFR010W RPC17P47076 161 aa3.87□□□□□ -1.79
UBP6YFR010W YJR154WP47181 346 aa3.87□□□□□ -1.79
UBP6YFR010W YGL204CP53089 101 aa3.87□□□□□ -1.79
UBP6YFR010W PKP2P53170 491 aa3.87□□□□□ -1.79
UBP6YFR010W RCF2P53721 224 aa3.87□□□□□ -1.79
UBP6YFR010W YNL140CP53910 189 aa3.87□□□□□ -1.79
UBP6YFR010W UBP16Q02863 499 aa3.87□□□□□ -1.79
UBP6YFR010W MMT1Q03218 510 aa3.87□□□□□ -1.79
UBP6YFR010W SLD5Q03406 294 aa3.87□□□□□ -1.79
UBP6YFR010W ADH6Q04894 360 aaKnown RBP3.87□□□□□ -1.79
UBP6YFR010W THI3Q07471 609 aa3.87□□□□□ -1.79
UBP6YFR010W YOL073CQ08232 322 aa3.87□□□□□ -1.79
UBP6YFR010W RSA1Q08932 381 aa3.87□□□□□ -1.79
UBP6YFR010W ACF2Q12168 779 aa3.87□□□□□ -1.79
UBP6YFR010W TRM13Q12383 476 aa3.87□□□□□ -1.79
UBP6YFR010W YBR255C-AQ3E776 120 aa3.87□□□□□ -1.79
UBP6YFR010W YBR121C-AP0C5L4 52 aa3.86□□□□□ -1.79
UBP6YFR010W NFT1P0CE68 1218 aa3.86□□□□□ -1.79
UBP6YFR010W SRP54P20424 541 aaKnown RBP3.86□□□□□ -1.79
UBP6YFR010W ERG4P25340 473 aa3.86□□□□□ -1.79
UBP6YFR010W CHA1P25379 360 aaKnown RBP3.86□□□□□ -1.79
UBP6YFR010W VPH2P32341 215 aa3.86□□□□□ -1.79
UBP6YFR010W PRP21P32524 280 aaPredicted RBP3.86□□□□□ -1.79
UBP6YFR010W NRP1P32770 719 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
UBP6YFR010W YSC83P32792 385 aa3.86□□□□□ -1.79
UBP6YFR010W REC114P32841 428 aa3.86□□□□□ -1.79
UBP6YFR010W RPC34P32910 317 aa3.86□□□□□ -1.79
UBP6YFR010W SUL1P38359 859 aa3.86□□□□□ -1.79
UBP6YFR010W YHR112CP38716 378 aa3.86□□□□□ -1.79
UBP6YFR010W UBA4P38820 440 aa3.86□□□□□ -1.79
UBP6YFR010W CCT4P39078 528 aaKnown RBP3.86□□□□□ -1.79
UBP6YFR010W FRT2P39734 528 aa3.86□□□□□ -1.79
UBP6YFR010W YER184CP39961 794 aa3.86□□□□□ -1.79
UBP6YFR010W OPT1P40897 799 aa3.86□□□□□ -1.79
UBP6YFR010W ALB1P47019 175 aaPredicted RBP3.86□□□□□ -1.79
UBP6YFR010W BNA3P47039 444 aaKnown RBP3.86□□□□□ -1.79
UBP6YFR010W NRG1Q03125 231 aa3.86□□□□□ -1.79
UBP6YFR010W YDR248CQ03786 193 aa3.86□□□□□ -1.79
UBP6YFR010W CTK1Q03957 528 aaKnown RBP3.86□□□□□ -1.79
UBP6YFR010W BUR2Q05949 395 aa3.86□□□□□ -1.79
UBP6YFR010W ARR3Q06598 404 aa3.86□□□□□ -1.79
UBP6YFR010W CYK3Q07533 885 aa3.86□□□□□ -1.79
UBP6YFR010W RPN8Q08723 338 aaKnown RBP3.86□□□□□ -1.79
UBP6YFR010W YPL216WQ08964 1102 aa3.86□□□□□ -1.79
UBP6YFR010W YPR1Q12458 312 aa3.86□□□□□ -1.79
UBP6YFR010W RRI1Q12468 440 aa3.86□□□□□ -1.79
UBP6YFR010W PET20Q99373 253 aa3.86□□□□□ -1.79
UBP6YFR010W AAC1P04710 309 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 62.7 ms