RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W RNA1P11745 407 aaKnown RBP2.91□□□□□ -1.94
SEC4YFL005W PET123P17558 318 aa2.91□□□□□ -1.94
SEC4YFL005W UBA1P22515 1024 aaKnown RBP2.91□□□□□ -1.94
SEC4YFL005W POP5P28005 173 aa2.91□□□□□ -1.94
SEC4YFL005W TOA2P32774 122 aa2.91□□□□□ -1.94
SEC4YFL005W MCR1P36060 302 aaKnown RBP2.91□□□□□ -1.94
SEC4YFL005W YHR177WP38867 453 aa2.91□□□□□ -1.94
SEC4YFL005W PAN6P40459 309 aa2.91□□□□□ -1.94
SEC4YFL005W TOS2P50078 622 aa2.91□□□□□ -1.94
SEC4YFL005W RRN9P53437 365 aa2.91□□□□□ -1.94
SEC4YFL005W YNR068CP53754 272 aa2.91□□□□□ -1.94
SEC4YFL005W COS1P53822 381 aa2.91□□□□□ -1.94
SEC4YFL005W DBP9Q06218 594 aaKnown RBP2.91□□□□□ -1.94
SEC4YFL005W MRPL35Q06678 367 aa2.91□□□□□ -1.94
SEC4YFL005W ASA1Q06822 443 aa2.91□□□□□ -1.94
SEC4YFL005W LOT6Q07923 191 aa2.91□□□□□ -1.94
SEC4YFL005W LDS2Q08218 356 aa2.91□□□□□ -1.94
SEC4YFL005W SCH9P11792 824 aaKnown RBP2.9□□□□□ -1.95
SEC4YFL005W RDS1P25611 832 aa2.9□□□□□ -1.95
SEC4YFL005W SPT10P35208 640 aa2.9□□□□□ -1.95
SEC4YFL005W SIF2P38262 535 aa2.9□□□□□ -1.95
SEC4YFL005W ATP22P50273 684 aaPredicted RBP2.9□□□□□ -1.95
SEC4YFL005W RRP46P53256 223 aaPredicted RBP2.9□□□□□ -1.95
SEC4YFL005W ALF1P53904 254 aa2.9□□□□□ -1.95
SEC4YFL005W YMR102CQ03177 834 aa2.9□□□□□ -1.95
SEC4YFL005W SMC5Q08204 1093 aa2.9□□□□□ -1.95
SEC4YFL005W FDH1Q08911 376 aa2.9□□□□□ -1.95
SEC4YFL005W RSA1Q08932 381 aa2.9□□□□□ -1.95
SEC4YFL005W YGK3Q12222 375 aaPredicted RBP2.9□□□□□ -1.95
SEC4YFL005W NBL1Q3E7Y6 73 aa2.9□□□□□ -1.95
SEC4YFL005W PIS1P06197 220 aaKnown RBP2.89□□□□□ -1.95
SEC4YFL005W TPM1P17536 199 aaKnown RBP2.89□□□□□ -1.95
SEC4YFL005W PSO2P30620 661 aa2.89□□□□□ -1.95
SEC4YFL005W DPH5P32469 300 aaPredicted RBP2.89□□□□□ -1.95
SEC4YFL005W UIP5P36137 443 aa2.89□□□□□ -1.95
SEC4YFL005W GPX2P38143 162 aa2.89□□□□□ -1.95
SEC4YFL005W MAM33P40513 266 aa2.89□□□□□ -1.95
SEC4YFL005W RPA34P47006 233 aaPredicted RBP2.89□□□□□ -1.95
SEC4YFL005W AIM24P47127 394 aa2.89□□□□□ -1.95
SEC4YFL005W TRM112P53738 135 aaPredicted RBP2.89□□□□□ -1.95
SEC4YFL005W UTP6Q02354 440 aaKnown RBP2.89□□□□□ -1.95
SEC4YFL005W PRM6Q04705 352 aa2.89□□□□□ -1.95
SEC4YFL005W YDR286CQ05530 114 aa2.89□□□□□ -1.95
SEC4YFL005W IRC25Q07951 179 aa2.89□□□□□ -1.95
SEC4YFL005W PGC1Q08959 321 aa2.89□□□□□ -1.95
SEC4YFL005W EAF3Q12432 401 aa2.89□□□□□ -1.95
SEC4YFL005W NAM2P11325 894 aa2.88□□□□□ -1.95
SEC4YFL005W MSI1P13712 422 aa2.88□□□□□ -1.95
SEC4YFL005W RPB5P20434 215 aa2.88□□□□□ -1.95
SEC4YFL005W ANP1P32629 500 aa2.88□□□□□ -1.95
SEC4YFL005W RAD5P32849 1169 aaPredicted RBP2.88□□□□□ -1.95
SEC4YFL005W TIR2P33890 251 aa2.88□□□□□ -1.95
SEC4YFL005W GEP4P38812 185 aa2.88□□□□□ -1.95
SEC4YFL005W HAC1P41546 238 aa2.88□□□□□ -1.95
SEC4YFL005W FYV8P46949 817 aaKnown RBP2.88□□□□□ -1.95
SEC4YFL005W YJR085CP47131 105 aaKnown RBP2.88□□□□□ -1.95
SEC4YFL005W MPS2P53159 387 aa2.88□□□□□ -1.95
SEC4YFL005W YNL143CP53908 130 aa2.88□□□□□ -1.95
SEC4YFL005W PEX27Q08580 376 aa2.88□□□□□ -1.95
SEC4YFL005W RRG7Q08774 242 aaPredicted RBP2.88□□□□□ -1.95
SEC4YFL005W SFG1Q12507 346 aa2.88□□□□□ -1.95
SEC4YFL005W ADH2P00331 348 aaKnown RBP2.87□□□□□ -1.95
SEC4YFL005W THR4P16120 514 aaKnown RBP2.87□□□□□ -1.95
SEC4YFL005W MRPL8P22353 238 aa2.87□□□□□ -1.95
SEC4YFL005W SMI1P32566 505 aa2.87□□□□□ -1.95
SEC4YFL005W YEL043WP32618 956 aa2.87□□□□□ -1.95
SEC4YFL005W CSE2P33308 149 aa2.87□□□□□ -1.95
SEC4YFL005W SDS24P38314 527 aa2.87□□□□□ -1.95
SEC4YFL005W YHK8P38776 514 aa2.87□□□□□ -1.95
SEC4YFL005W LCB3P47013 409 aa2.87□□□□□ -1.95
SEC4YFL005W EFM3P47163 339 aa2.87□□□□□ -1.95
SEC4YFL005W CUE3P53137 624 aaKnown RBP2.87□□□□□ -1.95
SEC4YFL005W MST27P53176 234 aa2.87□□□□□ -1.95
SEC4YFL005W RET3P53600 189 aa2.87□□□□□ -1.95
SEC4YFL005W AQR1P53943 586 aa2.87□□□□□ -1.95
SEC4YFL005W ADA2Q02336 434 aa2.87□□□□□ -1.95
SEC4YFL005W TDA1Q03533 586 aa2.87□□□□□ -1.95
SEC4YFL005W RTN1Q04947 295 aaKnown RBP2.87□□□□□ -1.95
SEC4YFL005W PSY3Q12318 242 aa2.87□□□□□ -1.95
SEC4YFL005W JID1Q12350 301 aa2.87□□□□□ -1.95
SEC4YFL005W AHC1Q12433 566 aa2.87□□□□□ -1.95
SEC4YFL005W HTZ1Q12692 134 aaKnown RBP2.87□□□□□ -1.95
SEC4YFL005W YCR024C-BQ3E7Z8 88 aa2.87□□□□□ -1.95
SEC4YFL005W MAS2P11914 482 aa2.86□□□□□ -1.95
SEC4YFL005W CLN3P13365 580 aa2.86□□□□□ -1.95
SEC4YFL005W TAL1P15019 335 aaKnown RBP2.86□□□□□ -1.95
SEC4YFL005W VMA2P16140 517 aaKnown RBP2.86□□□□□ -1.95
SEC4YFL005W ISY1P21374 235 aaPredicted RBP2.86□□□□□ -1.95
SEC4YFL005W KRR1P25586 316 aaPredicted RBP2.86□□□□□ -1.95
SEC4YFL005W MSK1P32048 576 aa2.86□□□□□ -1.95
SEC4YFL005W EFB1P32471 206 aaKnown RBP2.86□□□□□ -1.95
SEC4YFL005W SWD3P38123 315 aa2.86□□□□□ -1.95
SEC4YFL005W YHR131CP38835 850 aa2.86□□□□□ -1.95
SEC4YFL005W LYS12P40495 371 aaKnown RBP2.86□□□□□ -1.95
SEC4YFL005W SNL1P40548 159 aa2.86□□□□□ -1.95
SEC4YFL005W RIF2Q06208 395 aa2.86□□□□□ -1.95
SEC4YFL005W YPR078CQ06813 372 aa2.86□□□□□ -1.95
SEC4YFL005W PLP2Q12017 286 aa2.86□□□□□ -1.95
SEC4YFL005W HRT3Q12347 344 aa2.86□□□□□ -1.95
SEC4YFL005W MEX67Q99257 599 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms