RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B JID1Q12350 301 aa2.57□□□□□ -2
YFL002W-BYFL002W-B PDE2P06776 526 aa2.56□□□□□ -2
YFL002W-BYFL002W-B YEF1P32622 495 aa2.56□□□□□ -2
YFL002W-BYFL002W-B ANR2P36090 516 aaPredicted RBP2.56□□□□□ -2
YFL002W-BYFL002W-B HEM14P40012 539 aa2.56□□□□□ -2
YFL002W-BYFL002W-B DFG10P40526 253 aa2.56□□□□□ -2
YFL002W-BYFL002W-B ABM1P47146 123 aa2.56□□□□□ -2
YFL002W-BYFL002W-B RSC1P53236 928 aa2.56□□□□□ -2
YFL002W-BYFL002W-B NDE2Q07500 545 aa2.56□□□□□ -2
YFL002W-BYFL002W-B SMC5Q08204 1093 aa2.56□□□□□ -2
YFL002W-BYFL002W-B ECM8P38246 354 aa2.55□□□□□ -2
YFL002W-BYFL002W-B TIM17P39515 158 aa2.55□□□□□ -2
YFL002W-BYFL002W-B STE24P47154 453 aa2.55□□□□□ -2
YFL002W-BYFL002W-B YGR117CP53270 476 aa2.55□□□□□ -2
YFL002W-BYFL002W-B RRN9P53437 365 aa2.55□□□□□ -2
YFL002W-BYFL002W-B MRPS16Q02608 121 aa2.55□□□□□ -2
YFL002W-BYFL002W-B SPE3Q12074 293 aaKnown RBP2.55□□□□□ -2
YFL002W-BYFL002W-B NAG1Q8TGN9 163 aa2.55□□□□□ -2
YFL002W-BYFL002W-B TPK3P05986 398 aa2.54□□□□□ -2
YFL002W-BYFL002W-B PIS1P06197 220 aaKnown RBP2.54□□□□□ -2
YFL002W-BYFL002W-B SLM5P25345 492 aaKnown RBP2.54□□□□□ -2
YFL002W-BYFL002W-B HSP104P31539 908 aaKnown RBP2.54□□□□□ -2
YFL002W-BYFL002W-B COX13P32799 129 aa2.54□□□□□ -2
YFL002W-BYFL002W-B LTV1P34078 463 aa2.54□□□□□ -2
YFL002W-BYFL002W-B PFF1P38244 976 aa2.54□□□□□ -2
YFL002W-BYFL002W-B MNL1P38888 796 aa2.54□□□□□ -2
YFL002W-BYFL002W-B ATM1P40416 690 aa2.54□□□□□ -2
YFL002W-BYFL002W-B YPR091CQ06833 770 aa2.54□□□□□ -2
YFL002W-BYFL002W-B RPN5Q12250 445 aaKnown RBP2.54□□□□□ -2
YFL002W-BYFL002W-B COX4P04037 155 aa2.53□□□□□ -2
YFL002W-BYFL002W-B RPL12AP0CX53 165 aaKnown RBP2.53□□□□□ -2
YFL002W-BYFL002W-B RPL12BP0CX54 165 aa2.53□□□□□ -2
YFL002W-BYFL002W-B SPP381P38282 291 aaPredicted RBP2.53□□□□□ -2
YFL002W-BYFL002W-B YHR177WP38867 453 aa2.53□□□□□ -2
YFL002W-BYFL002W-B MAM33P40513 266 aa2.53□□□□□ -2
YFL002W-BYFL002W-B YIP5P53108 310 aa2.53□□□□□ -2
YFL002W-BYFL002W-B YGR018CP53211 109 aa2.53□□□□□ -2
YFL002W-BYFL002W-B YHC1Q05900 231 aaKnown RBP2.53□□□□□ -2
YFL002W-BYFL002W-B FCY22Q12119 530 aa2.53□□□□□ -2
YFL002W-BYFL002W-B CCH1P50077 2039 aa2.53□□□□□ -2
YFL002W-BYFL002W-B RPB5P20434 215 aa2.52□□□□□ -2.01
YFL002W-BYFL002W-B CDC50P25656 391 aa2.52□□□□□ -2.01
YFL002W-BYFL002W-B GEP4P38812 185 aa2.52□□□□□ -2.01
YFL002W-BYFL002W-B YNL208WP40159 199 aaKnown RBP2.52□□□□□ -2.01
YFL002W-BYFL002W-B URC2Q04411 772 aa2.52□□□□□ -2.01
YFL002W-BYFL002W-B RUP1Q12242 671 aa2.52□□□□□ -2.01
YFL002W-BYFL002W-B YOP1Q12402 180 aa2.52□□□□□ -2.01
YFL002W-BYFL002W-B ADH1P00330 348 aaKnown RBP2.51□□□□□ -2.01
YFL002W-BYFL002W-B PAB1P04147 577 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
YFL002W-BYFL002W-B RPL1AP0CX43 217 aaKnown RBP2.51□□□□□ -2.01
YFL002W-BYFL002W-B RPL1BP0CX44 217 aaKnown RBP2.51□□□□□ -2.01
YFL002W-BYFL002W-B MNE1P24720 663 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B TOA2P32774 122 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B OM14P38325 134 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B APJ1P53940 528 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B CIK1Q01649 594 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B SKI8Q02793 397 aaPredicted RBP2.51□□□□□ -2.01
YFL002W-BYFL002W-B NSE1Q07913 336 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B DNL4Q08387 944 aaPredicted RBP2.51□□□□□ -2.01
YFL002W-BYFL002W-B YDL199CQ12407 687 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B CEX1Q12453 761 aa2.51□□□□□ -2.01
YFL002W-BYFL002W-B PAR32Q12515 295 aaKnown RBP2.51□□□□□ -2.01
YFL002W-BYFL002W-B PRB1P09232 635 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B PRR1P28708 518 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B TIR2P33890 251 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B SKT5P34226 696 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B MCR1P36060 302 aaKnown RBP2.5□□□□□ -2.01
YFL002W-BYFL002W-B CMS1Q07897 291 aaKnown RBP2.5□□□□□ -2.01
YFL002W-BYFL002W-B LOT6Q07923 191 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B YOR376WQ08900 122 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B PSK1P31374 1356 aa2.5□□□□□ -2.01
YFL002W-BYFL002W-B CMK2P22517 447 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B CHA1P25379 360 aaKnown RBP2.49□□□□□ -2.01
YFL002W-BYFL002W-B PXA2P34230 853 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B DOA1P36037 715 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B WSC4P38739 605 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B SEO1P39709 593 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B BUD27P43573 796 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
YFL002W-BYFL002W-B CTK3P46963 296 aaPredicted RBP2.49□□□□□ -2.01
YFL002W-BYFL002W-B YML6P51998 286 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B TRM112P53738 135 aaPredicted RBP2.49□□□□□ -2.01
YFL002W-BYFL002W-B MCT1Q12283 360 aa2.49□□□□□ -2.01
YFL002W-BYFL002W-B ARF1P11076 181 aaKnown RBP2.48□□□□□ -2.01
YFL002W-BYFL002W-B RRP7P25368 297 aaPredicted RBP2.48□□□□□ -2.01
YFL002W-BYFL002W-B FUN26P31381 517 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B SPO23P33757 523 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B MLH1P38920 769 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B ALD5P40047 520 aaKnown RBP2.48□□□□□ -2.01
YFL002W-BYFL002W-B PAC11P40960 533 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B IGD1P43598 195 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B YJL055WP47044 245 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B YPS5P53057 165 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B CLD1P53264 445 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B PRM6Q04705 352 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B GAT3Q07928 141 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B LDS2Q08218 356 aa2.48□□□□□ -2.01
YFL002W-BYFL002W-B ZRC1P20107 442 aa2.47□□□□□ -2.01
YFL002W-BYFL002W-B RAD5P32849 1169 aaPredicted RBP2.47□□□□□ -2.01
YFL002W-BYFL002W-B MRPL27P36526 146 aaPredicted RBP2.47□□□□□ -2.01
YFL002W-BYFL002W-B KEG1P43614 200 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms