RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C RRF1P38771 230 aa1.2□□□□□ -2.22
SWI4YER111C YDR089WP38966 869 aa1.2□□□□□ -2.22
SWI4YER111C YIL169CP40442 995 aa1.2□□□□□ -2.22
SWI4YER111C WSC2P53832 503 aa1.2□□□□□ -2.22
SWI4YER111C GPI15P53961 229 aa1.2□□□□□ -2.22
SWI4YER111C RPL15BP54780 204 aaPredicted RBP1.2□□□□□ -2.22
SWI4YER111C PRP3Q03338 469 aaPredicted RBP1.2□□□□□ -2.22
SWI4YER111C CCE1Q03702 353 aa1.2□□□□□ -2.22
SWI4YER111C RRB1Q04225 511 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C AIM33Q04516 312 aa1.2□□□□□ -2.22
SWI4YER111C YLR297WQ05899 129 aa1.2□□□□□ -2.22
SWI4YER111C LDS2Q08218 356 aa1.2□□□□□ -2.22
SWI4YER111C AAD15Q08361 143 aa1.2□□□□□ -2.22
SWI4YER111C ATG34Q12292 412 aa1.2□□□□□ -2.22
SWI4YER111C NCA2Q12374 616 aa1.2□□□□□ -2.22
SWI4YER111C MRPL23Q12487 163 aaPredicted RBP1.2□□□□□ -2.22
SWI4YER111C FSH3Q99369 266 aa1.2□□□□□ -2.22
SWI4YER111C CDC37P06101 506 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C YER190C-BP0CX94 160 aa1.2□□□□□ -2.22
SWI4YER111C YEL077W-AP0CX95 160 aa1.2□□□□□ -2.22
SWI4YER111C YGR296C-BP0CX96 160 aa1.2□□□□□ -2.22
SWI4YER111C YPL283W-BP0CX97 160 aa1.2□□□□□ -2.22
SWI4YER111C YPR204C-AP0CX98 160 aa1.2□□□□□ -2.22
SWI4YER111C THR4P16120 514 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C TIP1P27654 210 aaPredicted RBP1.2□□□□□ -2.22
SWI4YER111C HMX1P32339 317 aa1.2□□□□□ -2.22
SWI4YER111C NDC1P32500 655 aa1.2□□□□□ -2.22
SWI4YER111C NAT2P37293 288 aa1.2□□□□□ -2.22
SWI4YER111C RTC2P38279 296 aa1.2□□□□□ -2.22
SWI4YER111C RTT107P38850 1070 aa1.2□□□□□ -2.22
SWI4YER111C YAL037WP39728 267 aa1.2□□□□□ -2.22
SWI4YER111C NCA3P46955 337 aa1.2□□□□□ -2.22
SWI4YER111C AZR1P50080 613 aa1.2□□□□□ -2.22
SWI4YER111C SCW4P53334 386 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C TRM112P53738 135 aaPredicted RBP1.2□□□□□ -2.22
SWI4YER111C ODC1Q03028 310 aa1.2□□□□□ -2.22
SWI4YER111C YLR413WQ06689 675 aa1.2□□□□□ -2.22
SWI4YER111C AHC1Q12433 566 aa1.2□□□□□ -2.22
SWI4YER111C SPO24Q3E752 67 aa1.2□□□□□ -2.22
SWI4YER111C CLN3P13365 580 aa1.2□□□□□ -2.22
SWI4YER111C CPR1P14832 162 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C HXT2P23585 541 aa1.2□□□□□ -2.22
SWI4YER111C CTR86P25355 563 aa1.2□□□□□ -2.22
SWI4YER111C MRP4P32902 394 aa1.2□□□□□ -2.22
SWI4YER111C PMU1P36069 295 aa1.2□□□□□ -2.22
SWI4YER111C MRPL40P36534 297 aa1.2□□□□□ -2.22
SWI4YER111C ARC40P38328 384 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C MTC4P38335 694 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C GEP4P38812 185 aa1.2□□□□□ -2.22
SWI4YER111C PRP39P39682 629 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C PCL6P40038 420 aa1.2□□□□□ -2.22
SWI4YER111C STE24P47154 453 aa1.2□□□□□ -2.22
SWI4YER111C YMR010WQ03687 405 aa1.2□□□□□ -2.22
SWI4YER111C COQ11Q05892 277 aa1.2□□□□□ -2.22
SWI4YER111C SNT309Q06091 175 aaPredicted RBP1.2□□□□□ -2.22
SWI4YER111C RRP9Q06506 573 aaKnown RBP1.2□□□□□ -2.22
SWI4YER111C NDL1Q06568 189 aa1.2□□□□□ -2.22
SWI4YER111C NDJ1Q12366 352 aa1.2□□□□□ -2.22
SWI4YER111C RGS2Q99188 309 aa1.2□□□□□ -2.22
SWI4YER111C PDR5P33302 1511 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C CBP2P03874 630 aaPredicted RBP1.19□□□□□ -2.22
SWI4YER111C HEM2P05373 342 aa1.19□□□□□ -2.22
SWI4YER111C RNR2P09938 399 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C RPL20AP0CX23 172 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C RPL20BP0CX24 172 aaPredicted RBP1.19□□□□□ -2.22
SWI4YER111C GCD2P12754 651 aaPredicted RBP1.19□□□□□ -2.22
SWI4YER111C PRP16P15938 1071 aaPredicted RBP1.19□□□□□ -2.22
SWI4YER111C OM45P16547 393 aa1.19□□□□□ -2.22
SWI4YER111C YCR022CP25620 114 aa1.19□□□□□ -2.22
SWI4YER111C MSK1P32048 576 aa1.19□□□□□ -2.22
SWI4YER111C NIP1P32497 812 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C MUD1P32605 298 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C MNS1P32906 549 aa1.19□□□□□ -2.22
SWI4YER111C KKQ8P36004 724 aa1.19□□□□□ -2.22
SWI4YER111C SPC34P36131 295 aa1.19□□□□□ -2.22
SWI4YER111C CHK1P38147 527 aa1.19□□□□□ -2.22
SWI4YER111C YMR262WP38430 313 aa1.19□□□□□ -2.22
SWI4YER111C BZZ1P38822 633 aa1.19□□□□□ -2.22
SWI4YER111C AIM20P40451 204 aa1.19□□□□□ -2.22
SWI4YER111C YPS6P40583 537 aa1.19□□□□□ -2.22
SWI4YER111C SSN8P47821 323 aa1.19□□□□□ -2.22
SWI4YER111C PMT5P52867 743 aa1.19□□□□□ -2.22
SWI4YER111C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
SWI4YER111C YPL068CQ02749 293 aa1.19□□□□□ -2.22
SWI4YER111C SKI7Q08491 747 aaPredicted RBP1.19□□□□□ -2.22
SWI4YER111C RNH203Q12338 110 aa1.19□□□□□ -2.22
SWI4YER111C NUP192P47054 1683 aa1.19□□□□□ -2.22
SWI4YER111C RPL18AP0CX49 186 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C RPL18BP0CX50 186 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C GAL3P13045 520 aa1.19□□□□□ -2.22
SWI4YER111C AMD1P15274 810 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C YCR043CP25361 127 aa1.19□□□□□ -2.22
SWI4YER111C GEX1P25596 615 aa1.19□□□□□ -2.22
SWI4YER111C CIN8P27895 1000 aa1.19□□□□□ -2.22
SWI4YER111C PRO3P32263 286 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C ATO2P32907 282 aa1.19□□□□□ -2.22
SWI4YER111C SWC5P38326 303 aa1.19□□□□□ -2.22
SWI4YER111C FAA2P39518 744 aa1.19□□□□□ -2.22
SWI4YER111C LYS12P40495 371 aaKnown RBP1.19□□□□□ -2.22
SWI4YER111C OST1P41543 476 aaKnown RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms