RNA–Protein interactions for RNA: YER050C

RSM18, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM18, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM18	YER050C	FOL3	Q12676	427 aa	Predicted RBP	2.61	□□□□□ -1.99
RSM18	YER050C	ARO3	P14843	370 aa	Known RBP	2.6	□□□□□ -1.99
RSM18	YER050C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
RSM18	YER050C	SLM5	P25345	492 aa	Known RBP	2.6	□□□□□ -1.99
RSM18	YER050C	STN1	P38960	494 aa		2.6	□□□□□ -1.99
RSM18	YER050C	TIM17	P39515	158 aa		2.6	□□□□□ -1.99
RSM18	YER050C	TCB2	P48231	1178 aa		2.6	□□□□□ -1.99
RSM18	YER050C	YGR111W	P53265	400 aa		2.6	□□□□□ -1.99
RSM18	YER050C	YPR091C	Q06833	770 aa		2.6	□□□□□ -1.99
RSM18	YER050C	MCH1	Q07376	486 aa		2.6	□□□□□ -1.99
RSM18	YER050C	YDL114W	Q07530	308 aa		2.6	□□□□□ -1.99
RSM18	YER050C	DCI1	Q08558	271 aa		2.6	□□□□□ -1.99
RSM18	YER050C	YCR024C-B	Q3E7Z8	88 aa		2.6	□□□□□ -1.99
RSM18	YER050C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	RIP-Chip
RSM18	YER050C	PDE2	P06776	526 aa		2.59	□□□□□ -1.99
RSM18	YER050C	CBP6	P07253	162 aa	Predicted RBP	2.59	□□□□□ -1.99
RSM18	YER050C	ALG1	P16661	449 aa		2.59	□□□□□ -1.99
RSM18	YER050C	DEP1	P31385	405 aa		2.59	□□□□□ -1.99
RSM18	YER050C	ANR2	P36090	516 aa	Predicted RBP	2.59	□□□□□ -1.99
RSM18	YER050C	PTI1	P39927	425 aa	Predicted RBP	2.59	□□□□□ -1.99
RSM18	YER050C	SER3	P40054	469 aa		2.59	□□□□□ -1.99
RSM18	YER050C	ATM1	P40416	690 aa		2.59	□□□□□ -1.99
RSM18	YER050C	YPS5	P53057	165 aa		2.59	□□□□□ -1.99
RSM18	YER050C	SKI8	Q02793	397 aa	Predicted RBP	2.59	□□□□□ -1.99
RSM18	YER050C	FAB1	P34756	2278 aa		2.59	□□□□□ -1.99
RSM18	YER050C	ZRC1	P20107	442 aa		2.58	□□□□□ -2
RSM18	YER050C	YKL097C	P34245	136 aa		2.58	□□□□□ -2
RSM18	YER050C	DOA1	P36037	715 aa		2.58	□□□□□ -2
RSM18	YER050C	ECM8	P38246	354 aa		2.58	□□□□□ -2
RSM18	YER050C	FAD1	P38913	306 aa		2.58	□□□□□ -2
RSM18	YER050C	TPS1	Q00764	495 aa	Known RBP	2.58	□□□□□ -2
RSM18	YER050C	YMR010W	Q03687	405 aa		2.58	□□□□□ -2
RSM18	YER050C	YDR341C	Q05506	607 aa	Known RBP	2.58	□□□□□ -2
RSM18	YER050C	NSE1	Q07913	336 aa		2.58	□□□□□ -2
RSM18	YER050C	FCY22	Q12119	530 aa		2.58	□□□□□ -2
RSM18	YER050C	PCL9	Q12477	304 aa		2.58	□□□□□ -2
RSM18	YER050C	TPK3	P05986	398 aa		2.57	□□□□□ -2
RSM18	YER050C	STE7	P06784	515 aa		2.57	□□□□□ -2
RSM18	YER050C	PRB1	P09232	635 aa		2.57	□□□□□ -2
RSM18	YER050C	PHO91	P27514	894 aa		2.57	□□□□□ -2
RSM18	YER050C	VMA8	P32610	256 aa	Known RBP	2.57	□□□□□ -2
RSM18	YER050C	MCR1	P36060	302 aa	Known RBP	2.57	□□□□□ -2
RSM18	YER050C	CHS6	P40955	746 aa		2.57	□□□□□ -2
RSM18	YER050C	IGD1	P43598	195 aa		2.57	□□□□□ -2
RSM18	YER050C	YGL262W	P53054	175 aa		2.57	□□□□□ -2
RSM18	YER050C	FLC3	P53121	802 aa		2.57	□□□□□ -2
RSM18	YER050C	YPL107W	Q02873	248 aa		2.57	□□□□□ -2
RSM18	YER050C	YLR456W	Q06199	204 aa		2.57	□□□□□ -2
RSM18	YER050C	MFG1	Q07684	458 aa		2.57	□□□□□ -2
RSM18	YER050C	HMS1	Q12398	434 aa		2.57	□□□□□ -2
RSM18	YER050C	YOP1	Q12402	180 aa		2.57	□□□□□ -2
RSM18	YER050C	ERP4	Q12450	207 aa		2.57	□□□□□ -2
RSM18	YER050C	SSC1	P0CS90	654 aa	Known RBP	2.56	□□□□□ -2
RSM18	YER050C	ARF1	P11076	181 aa	Known RBP	2.56	□□□□□ -2
RSM18	YER050C	DPH2	P32461	534 aa		2.56	□□□□□ -2
RSM18	YER050C	LTV1	P34078	463 aa		2.56	□□□□□ -2
RSM18	YER050C	PFS1	P38872	237 aa		2.56	□□□□□ -2
RSM18	YER050C	SEC9	P40357	651 aa		2.56	□□□□□ -2
RSM18	YER050C	STE24	P47154	453 aa		2.56	□□□□□ -2
RSM18	YER050C	YIP5	P53108	310 aa		2.56	□□□□□ -2
RSM18	YER050C	RSC1	P53236	928 aa		2.56	□□□□□ -2
RSM18	YER050C	COS1	P53822	381 aa		2.56	□□□□□ -2
RSM18	YER050C	PRP3	Q03338	469 aa	Predicted RBP	2.56	□□□□□ -2
RSM18	YER050C	FUN26	P31381	517 aa		2.55	□□□□□ -2
RSM18	YER050C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.55	□□□□□ -2	not detected
RSM18	YER050C	STP2	P38704	541 aa		2.55	□□□□□ -2
RSM18	YER050C	GEP4	P38812	185 aa		2.55	□□□□□ -2
RSM18	YER050C	GPI16	P38875	610 aa		2.55	□□□□□ -2
RSM18	YER050C	PAC11	P40960	533 aa		2.55	□□□□□ -2
RSM18	YER050C	IES4	Q08561	116 aa		2.55	□□□□□ -2
RSM18	YER050C	SMC6	Q12749	1114 aa		2.55	□□□□□ -2
RSM18	YER050C	MEX67	Q99257	599 aa	Known RBP	2.55	□□□□□ -2
RSM18	YER050C	SOL2	P37262	315 aa		2.54	□□□□□ -2
RSM18	YER050C	QDR3	P38227	689 aa		2.54	□□□□□ -2
RSM18	YER050C	LSM12	P38828	187 aa	Known RBP	2.54	□□□□□ -2
RSM18	YER050C	ALD5	P40047	520 aa	Known RBP	2.54	□□□□□ -2
RSM18	YER050C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.54	□□□□□ -2	not detected
RSM18	YER050C	YFL012W	P43580	148 aa		2.54	□□□□□ -2
RSM18	YER050C	TRF5	P48561	642 aa	Known RBP	2.54	□□□□□ -2
RSM18	YER050C	ROG1	P53118	685 aa		2.54	□□□□□ -2
RSM18	YER050C	UAF30	Q08747	228 aa		2.54	□□□□□ -2
RSM18	YER050C	YDL199C	Q12407	687 aa		2.54	□□□□□ -2
RSM18	YER050C	CCH1	P50077	2039 aa		2.54	□□□□□ -2
RSM18	YER050C	ADH1	P00330	348 aa	Known RBP	2.53	□□□□□ -2
RSM18	YER050C	RPL12A	P0CX53	165 aa	Known RBP	2.53	□□□□□ -2
RSM18	YER050C	RPL12B	P0CX54	165 aa		2.53	□□□□□ -2
RSM18	YER050C	GPX2	P38143	162 aa		2.53	□□□□□ -2
RSM18	YER050C	BMT2	P38278	337 aa		2.53	□□□□□ -2
RSM18	YER050C	SRP72	P38688	640 aa	Known RBP	2.53	□□□□□ -2
RSM18	YER050C	REX2	P54964	269 aa	Known RBP	2.53	□□□□□ -2
RSM18	YER050C	CIK1	Q01649	594 aa		2.53	□□□□□ -2
RSM18	YER050C	YDR541C	Q03049	344 aa		2.53	□□□□□ -2
RSM18	YER050C	ERO1	Q03103	563 aa		2.53	□□□□□ -2
RSM18	YER050C	RNH203	Q12338	110 aa		2.53	□□□□□ -2
RSM18	YER050C	OPI3	P05375	206 aa		2.52	□□□□□ -2.01
RSM18	YER050C	CMK2	P22517	447 aa		2.52	□□□□□ -2.01
RSM18	YER050C	GIT1	P25346	518 aa		2.52	□□□□□ -2.01
RSM18	YER050C	ZUO1	P32527	433 aa	Known RBP	2.52	□□□□□ -2.01
RSM18	YER050C	TIR2	P33890	251 aa		2.52	□□□□□ -2.01
RSM18	YER050C	SLX1	P38324	304 aa		2.52	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms