RNA–Protein interactions for RNA: YDR478W

SNM1, Transcript of Ribonuclease MRP complex subunit, yeast

Gene SNM1, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNM1	YDR478W	DCP1	Q12517	231 aa	Predicted RBP	4.63	□□□□□ -1.67
SNM1	YDR478W	MTF1	P14908	341 aa	Known RBP	4.62	□□□□□ -1.67
SNM1	YDR478W	YPS1	P32329	569 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	NDC1	P32500	655 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	GCD14	P46959	383 aa	Predicted RBP	4.62	□□□□□ -1.67
SNM1	YDR478W	SFH5	P47008	294 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	TOS2	P50078	622 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	AZR1	P50080	613 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	SHE10	P53075	577 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	SPR6	Q01684	191 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	PIR3	Q03180	325 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	ERV41	Q04651	352 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	YAP7	Q08182	245 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	POM152	P39685	1337 aa		4.62	□□□□□ -1.67
SNM1	YDR478W	PTP1	P25044	335 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	CIN8	P27895	1000 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	YEF1	P32622	495 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	BUD2	P33314	1104 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	LOS1	P33418	1100 aa	Predicted RBP	4.61	□□□□□ -1.67
SNM1	YDR478W	DHH1	P39517	506 aa	Known RBP	4.61	□□□□□ -1.67
SNM1	YDR478W	SIM1	P40472	476 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	RRT5	P43607	289 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	MPP6	P53725	186 aa	Predicted RBP	4.61	□□□□□ -1.67
SNM1	YDR478W	CAF40	P53829	373 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	YMR181C	Q03231	154 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	APC4	Q04601	652 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	YMR034C	Q05131	434 aa	Predicted RBP	4.61	□□□□□ -1.67
SNM1	YDR478W	BUR2	Q05949	395 aa		4.61	□□□□□ -1.67
SNM1	YDR478W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SNM1	YDR478W	RPS16A	P0CX51	143 aa	Known RBP	4.6	□□□□□ -1.67
SNM1	YDR478W	RPS16B	P0CX52	143 aa	Known RBP	4.6	□□□□□ -1.67
SNM1	YDR478W	YFL068W	P0CX99	160 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	YLL066W-A	P0CY00	160 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	YLL067W-A	P0CY01	160 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	CKI1	P20485	582 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	YCL068C	P25593	260 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	VAM7	P32912	316 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	MCR1	P36060	302 aa	Known RBP	4.6	□□□□□ -1.67
SNM1	YDR478W	YMR262W	P38430	313 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	BZZ1	P38822	633 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	GTO1	P48239	356 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	RPM2	Q02773	1202 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	DIG1	Q03063	452 aa	Known RBP	4.6	□□□□□ -1.67
SNM1	YDR478W	FMP42	Q04991	504 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	BCH1	Q05029	724 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	APC5	Q08683	685 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	RAX1	Q08760	435 aa		4.6	□□□□□ -1.67
SNM1	YDR478W	SSA3	P09435	649 aa	Known RBP	4.59	□□□□□ -1.67
SNM1	YDR478W	MSS116	P15424	664 aa	Known RBP	4.59	□□□□□ -1.67
SNM1	YDR478W	SLY1	P22213	666 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	ITR1	P30605	584 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	IME2	P32581	645 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	ASK1	P35734	292 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	YKL070W	P36087	169 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	MRPL37	P36532	105 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	CHK1	P38147	527 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	YIL152W	P40455	235 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	NUP84	P52891	726 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	MND1	P53102	219 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	TIM11	P81449	96 aa	Predicted RBP	4.59	□□□□□ -1.67
SNM1	YDR478W	CCE1	Q03702	353 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	CSI1	Q04368	295 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	SHS1	Q07657	551 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	YPR1	Q12458	312 aa		4.59	□□□□□ -1.67
SNM1	YDR478W	RRP12	Q12754	1228 aa	Known RBP	4.59	□□□□□ -1.67
SNM1	YDR478W	CAR2	P07991	424 aa	Known RBP	4.58	□□□□□ -1.68
SNM1	YDR478W	ATR1	P13090	542 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	YCR022C	P25620	114 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	TOA2	P32774	122 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	RPC25	P35718	212 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	RIB5	P38145	238 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	FAA2	P39518	744 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	BTT1	P40314	149 aa	Predicted RBP	4.58	□□□□□ -1.68
SNM1	YDR478W	UTP25	P40498	721 aa	Known RBP	4.58	□□□□□ -1.68
SNM1	YDR478W	RTT101	P47050	842 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	RRN9	P53437	365 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	IBD2	P53892	351 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	GRX3	Q03835	250 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	NDE2	Q07500	545 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	RRT8	Q08219	342 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	DNL4	Q08387	944 aa	Predicted RBP	4.58	□□□□□ -1.68
SNM1	YDR478W	SNX3	Q08826	162 aa	Known RBP	4.58	□□□□□ -1.68
SNM1	YDR478W	YOR338W	Q99326	363 aa		4.58	□□□□□ -1.68
SNM1	YDR478W	RPL20A	P0CX23	172 aa	Known RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	RPL20B	P0CX24	172 aa	Predicted RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	RPL18A	P0CX49	186 aa	Known RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	RPL18B	P0CX50	186 aa	Known RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	CAP2	P13517	287 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	SPS22	P25380	463 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	PUT3	P25502	979 aa	Predicted RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	MXR2	P25566	168 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	YUR1	P26725	428 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	ATO2	P32907	282 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	PMU1	P36069	295 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	ARC40	P38328	384 aa	Known RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	YIL169C	P40442	995 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	CDC40	P40968	455 aa	Predicted RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	YGR168C	P53293	376 aa		4.57	□□□□□ -1.68
SNM1	YDR478W	SCW4	P53334	386 aa	Known RBP	4.57	□□□□□ -1.68
SNM1	YDR478W	TRM112	P53738	135 aa	Predicted RBP	4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms