RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeast

Gene RPB7, Length 516 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB7	YDR404C	RAD61	Q99359	647 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	MSB2	P32334	1306 aa		4.18	□□□□□ -1.74
RPB7	YDR404C	LAA1	P39526	2014 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	NFT1	P0CE68	1218 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	YAR066W	P0CX18	203 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	YHR214W	P0CX19	203 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	YCR022C	P25620	114 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	TRS65	P32893	560 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	ATO2	P32907	282 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	STP2	P38704	541 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	MNL1	P38888	796 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	LYS1	P38998	373 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPB7	YDR404C	ASN2	P49090	572 aa	Known RBP	4.17	□□□□□ -1.74
RPB7	YDR404C	ARK1	P53974	638 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	YDL144C	Q07589	356 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	NSE1	Q07913	336 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	REX4	Q08237	289 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	YLL056C	Q12177	298 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	RUP1	Q12242	671 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	ORT1	Q12375	292 aa		4.17	□□□□□ -1.74
RPB7	YDR404C	UTP20	P35194	2493 aa	Known RBP	4.16	□□□□□ -1.74
RPB7	YDR404C	CHS1	P08004	1131 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	IMA3	P0CW40	589 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	IMA4	P0CW41	589 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	UBA1	P22515	1024 aa	Known RBP	4.16	□□□□□ -1.74
RPB7	YDR404C	YCR043C	P25361	127 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	CYS4	P32582	507 aa	Known RBP	4.16	□□□□□ -1.74
RPB7	YDR404C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RPB7	YDR404C	COY1	P34237	679 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	RRP1	P35178	278 aa	Predicted RBP	4.16	□□□□□ -1.74
RPB7	YDR404C	QDR3	P38227	689 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	INM1	P38710	295 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	PES4	P39684	611 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	HAT2	P39984	401 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	IKS1	P47042	667 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	PHB2	P50085	310 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	PDR16	P53860	351 aa	Known RBP	4.16	□□□□□ -1.74
RPB7	YDR404C	GPI15	P53961	229 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	URH1	Q04179	340 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	FMP42	Q04991	504 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	SNA4	Q07549	140 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	IMA2	Q08295	589 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	CSF1	Q12150	2958 aa		4.16	□□□□□ -1.74
RPB7	YDR404C	CDC21	P06785	304 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	RPS19A	P07280	144 aa	Known RBP	4.15	□□□□□ -1.75
RPB7	YDR404C	RPS19B	P07281	144 aa	Predicted RBP	4.15	□□□□□ -1.75
RPB7	YDR404C	SCH9	P11792	824 aa	Known RBP	4.15	□□□□□ -1.75
RPB7	YDR404C	COQ1	P18900	473 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	RAD57	P25301	460 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	YSC83	P32792	385 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	RIM2	P38127	377 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	MET30	P39014	640 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	GCD10	P41814	478 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	DIM1	P41819	318 aa	Known RBP	4.15	□□□□□ -1.75
RPB7	YDR404C	TES1	P41903	349 aa	Known RBP	4.15	□□□□□ -1.75
RPB7	YDR404C	CUE3	P53137	624 aa	Known RBP	4.15	□□□□□ -1.75
RPB7	YDR404C	FRE4	P53746	719 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	YNL143C	P53908	130 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	AQR1	P53943	586 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	RPM2	Q02773	1202 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	ODC1	Q03028	310 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	IPK1	Q06667	281 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	YPR022C	Q12139	1133 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	ATG34	Q12292	412 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	RMD5	Q12508	421 aa		4.15	□□□□□ -1.75
RPB7	YDR404C	NDI1	P32340	513 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	GLC7	P32598	312 aa	Known RBP	4.14	□□□□□ -1.75
RPB7	YDR404C	PTR2	P32901	601 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	RTT107	P38850	1070 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	VPS45	P38932	577 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	YND1	P40009	630 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	SHO1	P40073	367 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	YIL169C	P40442	995 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	BRO1	P48582	844 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	AVT4	P50944	713 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	SHE4	P51534	789 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	LIF1	P53150	421 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	YNR068C	P53754	272 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	ADA2	Q02336	434 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	UTP6	Q02354	440 aa	Known RBP	4.14	□□□□□ -1.75
RPB7	YDR404C	YPL068C	Q02749	293 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	YLR281C	Q05863	155 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	SKI7	Q08491	747 aa	Predicted RBP	4.14	□□□□□ -1.75
RPB7	YDR404C	SRN2	Q99176	213 aa		4.14	□□□□□ -1.75
RPB7	YDR404C	MEX67	Q99257	599 aa	Known RBP	4.14	□□□□□ -1.75
RPB7	YDR404C	RPS14A	P06367	137 aa	Known RBP	4.13	□□□□□ -1.75
RPB7	YDR404C	DST1	P07273	309 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	MRS3	P10566	314 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	LSB5	P25369	354 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	ITR1	P30605	584 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	CRM1	P30822	1084 aa	Known RBP	4.13	□□□□□ -1.75
RPB7	YDR404C	KAP104	P38217	918 aa	Known RBP	4.13	□□□□□ -1.75
RPB7	YDR404C	RPS14B	P39516	138 aa	Known RBP	4.13	□□□□□ -1.75
RPB7	YDR404C	YER079W	P40052	210 aa	Known RBP	4.13	□□□□□ -1.75
RPB7	YDR404C	PAC11	P40960	533 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	RPA34	P47006	233 aa	Predicted RBP	4.13	□□□□□ -1.75
RPB7	YDR404C	EFM3	P47163	339 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	SGT1	Q08446	395 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	HIF1	Q12373	385 aa		4.13	□□□□□ -1.75
RPB7	YDR404C	SFG1	Q12507	346 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms