RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D CIN8P27895 1000 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D SPC34P36131 295 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D ECM4P36156 370 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D PCF11P39081 626 aaPredicted RBP2.75□□□□□ -1.97
YDR034C-DYDR034C-D YIR016WP40572 265 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D NAS6P50086 228 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D TAF6P53040 516 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D UBX2Q04228 584 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D SKI7Q08491 747 aaPredicted RBP2.75□□□□□ -1.97
YDR034C-DYDR034C-D SKN1P33336 771 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D BMH2P34730 273 aaKnown RBP2.75□□□□□ -1.97
YDR034C-DYDR034C-D AIM29P36154 155 aa2.75□□□□□ -1.97
YDR034C-DYDR034C-D BTT1P40314 149 aaPredicted RBP2.75□□□□□ -1.97
YDR034C-DYDR034C-D MSS51P32335 436 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D LAG1P38703 411 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D DHH1P39517 506 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D YER079WP40052 210 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D SCD6P45978 349 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
YDR034C-DYDR034C-D NOP13P53883 403 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
YDR034C-DYDR034C-D YNL146WP53906 100 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D SPP2Q02521 185 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D RLI1Q03195 608 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D CCT4P39078 528 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D FMC1P40491 155 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D BNA6P43619 295 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D YGR117CP53270 476 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D MYO5Q04439 1219 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D LDS2Q08218 356 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D RRT12P25381 491 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D MEI5P32489 222 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D RPC37P36121 282 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D DSE1P40077 573 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D UTP25P40498 721 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D TRM112P53738 135 aaPredicted RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D SDO1Q07953 250 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D RDL1Q12305 139 aaKnown RBP2.74□□□□□ -1.97
YDR034C-DYDR034C-D YCR007CP25354 239 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D IST2P38250 946 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D SHO1P40073 367 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D MKC7P53379 596 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D GIM3P53900 129 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D SMP3Q04174 516 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D COQ11Q05892 277 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D TIP41Q12199 356 aa2.74□□□□□ -1.97
YDR034C-DYDR034C-D RPL5P26321 297 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D ADE1P27616 306 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D SPT10P35208 640 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D PRS4P38063 326 aaPredicted RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D OKP1P53298 406 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D IRC4Q03036 179 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D THI20Q08224 551 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D RPL24AP04449 155 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D DST1P07273 309 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D GCG1P32656 232 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D LYS12P40495 371 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D YIF1P53845 314 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D HEM2P05373 342 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D FUS3P16892 353 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D YPK2P18961 677 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D COQ3P27680 312 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D ROT2P38138 954 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D SUL1P38359 859 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D BIG1P38813 335 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D TIS11P47977 285 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D MSS11Q03825 758 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D TSR1Q07381 788 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D YOR338WQ99326 363 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D IKI3Q06706 1349 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D PGK1P00560 416 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D ATP1P07251 545 aaKnown RBP2.73□□□□□ -1.97
YDR034C-DYDR034C-D DUG3P53871 357 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D HXT11P54862 567 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D NUP116Q02630 1113 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D RRN11Q04712 507 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D PFA4Q12006 378 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D YLR049CQ12110 428 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D YOS9Q99220 542 aa2.73□□□□□ -1.97
YDR034C-DYDR034C-D ATP6P00854 259 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D PRP16P15938 1071 aaPredicted RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D LOS1P33418 1100 aaPredicted RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D MRX5P47007 382 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D YCL012CQ8J0M4 134 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D URA8P38627 578 aaPredicted RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D GAT1P43574 510 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D RRT5P43607 289 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D ORC5P50874 479 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D RTN1Q04947 295 aaKnown RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D GAT3Q07928 141 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D ALE1Q08548 619 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D DET1Q99288 334 aaKnown RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D RHO1P06780 209 aaKnown RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D HEM15P16622 393 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D GAS1P22146 559 aaKnown RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D RPI1P23250 407 aaKnown RBP2.72□□□□□ -1.97
YDR034C-DYDR034C-D CHS7P38843 316 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D POP1P41812 875 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D SLI1P53304 468 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D BET4Q00618 327 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D SLT2Q00772 484 aa2.72□□□□□ -1.97
YDR034C-DYDR034C-D CSM3Q04659 317 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms