RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	RNH70	P53331	553 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	RHO3	Q00245	231 aa	Known RBP	3.6	□□□□□ -1.83
RPO21	YDL140C	UIP4	Q08926	304 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	YLR046C	Q12253	270 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	GIS3	Q12418	502 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	AAT2	P23542	418 aa	Known RBP	3.6	□□□□□ -1.83
RPO21	YDL140C	PRO3	P32263	286 aa	Known RBP	3.6	□□□□□ -1.83
RPO21	YDL140C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.6	□□□□□ -1.83	not detected
RPO21	YDL140C	COS111	P38308	924 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	RPF1	P38805	295 aa	Known RBP	3.6	□□□□□ -1.83
RPO21	YDL140C	SBE22	P38814	852 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	ASG7	P46993	209 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	PET130	P47065	347 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	YGL101W	P53144	215 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	CUZ1	P53899	274 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	YPL014W	Q02606	381 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	TDA1	Q03533	586 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	SNX41	Q04053	625 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	YMR034C	Q05131	434 aa	Predicted RBP	3.6	□□□□□ -1.83
RPO21	YDL140C	PEX30	Q06169	523 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	YDL121C	Q07541	149 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	RKI1	Q12189	258 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	MMP1	Q12372	583 aa		3.6	□□□□□ -1.83
RPO21	YDL140C	APL3	P38065	1025 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	MUP1	P50276	574 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	SKI8	Q02793	397 aa	Predicted RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	HEL2	Q05580	639 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	PET54	P10834	293 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	SEC63	P14906	663 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	ERG4	P25340	473 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	PPA2	P28239	310 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	YBR220C	P38318	560 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	GNP1	P48813	663 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	TAD1	P53065	400 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	YGR012W	P53206	393 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	ERV25	P54837	211 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	SNZ1	Q03148	297 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	ROY1	Q04847	553 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	BRX1	Q08235	291 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	GPM3	Q12326	303 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	DDP1	Q99321	188 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	TDH2	P00358	332 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.83	not detected
RPO21	YDL140C	VPS33	P20795	691 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	IDP1	P21954	428 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	ARG1	P22768	420 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	LSB5	P25369	354 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	GEX1	P25596	615 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	SKN1	P33336	771 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	YET1	P35723	206 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	KKQ8	P36004	724 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	ALY1	P36117	915 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	GEX2	P36173	615 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	EMP65	P40085	556 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	YPS6	P40583	537 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	YJL171C	P46992	396 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	LCL3	P53153	274 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	PFA5	Q03289	374 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	FIN1	Q03898	291 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	TDA6	Q06466	467 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	TSC13	Q99190	310 aa		3.59	□□□□□ -1.83
RPO21	YDL140C	SEC7	P11075	2009 aa	Known RBP	3.59	□□□□□ -1.83
RPO21	YDL140C	APN1	P22936	367 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	OCA4	P25366	362 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	CTP1	P38152	299 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	MOH1	P38191	138 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	KRE29	P40026	464 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	GCD10	P41814	478 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	SWP1	Q02795	286 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	PRM15	Q03262	622 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	CSN9	Q03981	162 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	YDR514C	Q04408	483 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	SYT1	Q06836	1226 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	YOL029C	Q08187	201 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	YOR365C	Q08844	703 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	FAL1	Q12099	399 aa	Known RBP	3.59	□□□□□ -1.84
RPO21	YDL140C	NMD4	Q12129	218 aa		3.59	□□□□□ -1.84
RPO21	YDL140C	ILV5	P06168	395 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	RPC40	P07703	335 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	PRI2	P20457	528 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	FAR1	P21268	830 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	ISY1	P21374	235 aa	Predicted RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	SLM5	P25345	492 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	ADE1	P27616	306 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	GCS1	P35197	352 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	LDB7	P38210	180 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	MMM1	P41800	426 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	YFL066C	P43538	392 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	SCW11	P53189	542 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	RCF2	P53721	224 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	ENB1	Q08299	606 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	FRE3	Q08905	711 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	IZH4	Q99393	312 aa		3.58	□□□□□ -1.84
RPO21	YDL140C	RPL1A	P0CX43	217 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	RPL1B	P0CX44	217 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	PET9	P18239	318 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	ARO2	P28777	376 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	TIF11	P38912	153 aa	Known RBP	3.58	□□□□□ -1.84
RPO21	YDL140C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
RPO21	YDL140C	UTP7	P40055	554 aa	Known RBP	3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms