RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W ELP2P42935 788 aa5.28□□□□□ -1.56
SHM1YBR263W YJL043WP47053 257 aa5.28□□□□□ -1.56
SHM1YBR263W STE24P47154 453 aa5.28□□□□□ -1.56
SHM1YBR263W YGR012WP53206 393 aa5.28□□□□□ -1.56
SHM1YBR263W CSL4P53859 292 aaPredicted RBP5.28□□□□□ -1.56
SHM1YBR263W ERG13P54839 491 aaKnown RBP5.28□□□□□ -1.56
SHM1YBR263W TRS23Q03784 219 aa5.28□□□□□ -1.56
SHM1YBR263W SSQ1Q05931 657 aaPredicted RBP5.28□□□□□ -1.56
SHM1YBR263W ATG26Q06321 1198 aa5.28□□□□□ -1.56
SHM1YBR263W YLL007CQ07799 665 aa5.28□□□□□ -1.56
SHM1YBR263W PSR1Q07800 427 aa5.28□□□□□ -1.56
SHM1YBR263W TEN1Q07921 160 aa5.28□□□□□ -1.56
SHM1YBR263W MUM3Q08750 479 aa5.28□□□□□ -1.56
SHM1YBR263W GLE1Q12315 538 aa5.28□□□□□ -1.56
SHM1YBR263W THP2O13539 261 aaKnown RBP5.27□□□□□ -1.57
SHM1YBR263W ATP7P30902 174 aa5.27□□□□□ -1.57
SHM1YBR263W SIN4P32259 974 aa5.27□□□□□ -1.57
SHM1YBR263W SCO2P38072 301 aa5.27□□□□□ -1.57
SHM1YBR263W MTG2P38860 518 aa5.27□□□□□ -1.57
SHM1YBR263W YHR210CP38893 341 aa5.27□□□□□ -1.57
SHM1YBR263W FMP52P40008 231 aa5.27□□□□□ -1.57
SHM1YBR263W KEL2P50090 882 aa5.27□□□□□ -1.57
SHM1YBR263W YNL033WP53964 284 aa5.27□□□□□ -1.57
SHM1YBR263W YNL019CP53975 284 aa5.27□□□□□ -1.57
SHM1YBR263W CBS2P14905 389 aa5.26□□□□□ -1.57
SHM1YBR263W YAP1P19880 650 aaKnown RBP5.26□□□□□ -1.57
SHM1YBR263W PRE9P23638 258 aaKnown RBP5.26□□□□□ -1.57
SHM1YBR263W YCL049CP25577 312 aa5.26□□□□□ -1.57
SHM1YBR263W MKK2P32491 506 aa5.26□□□□□ -1.57
SHM1YBR263W NUP2P32499 720 aa5.26□□□□□ -1.57
SHM1YBR263W TDP1P38319 544 aa5.26□□□□□ -1.57
SHM1YBR263W RCK1P38622 512 aa5.26□□□□□ -1.57
SHM1YBR263W MTW1P39731 289 aa5.26□□□□□ -1.57
SHM1YBR263W LAS21P40367 830 aa5.26□□□□□ -1.57
SHM1YBR263W TIM54P47045 478 aa5.26□□□□□ -1.57
SHM1YBR263W JHD2P47156 728 aaPredicted RBP5.26□□□□□ -1.57
SHM1YBR263W CDH1P53197 566 aa5.26□□□□□ -1.57
SHM1YBR263W RHO4Q00246 291 aa5.26□□□□□ -1.57
SHM1YBR263W RSF1Q05043 376 aa5.26□□□□□ -1.57
SHM1YBR263W RXT3Q07458 294 aa5.26□□□□□ -1.57
SHM1YBR263W COS7Q07788 383 aa5.26□□□□□ -1.57
SHM1YBR263W YLR036CQ07986 203 aa5.26□□□□□ -1.57
SHM1YBR263W FRE7Q12333 620 aa5.26□□□□□ -1.57
SHM1YBR263W ERP4Q12450 207 aa5.26□□□□□ -1.57
SHM1YBR263W YOL087CQ99247 1116 aa5.26□□□□□ -1.57
SHM1YBR263W TAD3Q9URQ3 322 aa5.26□□□□□ -1.57
SHM1YBR263W FAA1P30624 700 aaKnown RBP5.26□□□□□ -1.57
SHM1YBR263W NGG1P32494 702 aa5.26□□□□□ -1.57
SHM1YBR263W PTR2P32901 601 aa5.26□□□□□ -1.57
SHM1YBR263W LST4P34239 828 aa5.26□□□□□ -1.57
SHM1YBR263W MRP8P35719 219 aa5.26□□□□□ -1.57
SHM1YBR263W AUR1P36107 401 aaPredicted RBP5.26□□□□□ -1.57
SHM1YBR263W YHR177WP38867 453 aa5.26□□□□□ -1.57
SHM1YBR263W MNN9P39107 395 aaKnown RBP5.26□□□□□ -1.57
SHM1YBR263W YER158CP40095 573 aa5.26□□□□□ -1.57
SHM1YBR263W RIC1P40395 1056 aa5.26□□□□□ -1.57
SHM1YBR263W MRPS18P42847 217 aa5.26□□□□□ -1.57
SHM1YBR263W ASK10P48361 1146 aa5.26□□□□□ -1.57
SHM1YBR263W GET1P53192 235 aa5.26□□□□□ -1.57
SHM1YBR263W GMC2Q06201 188 aa5.26□□□□□ -1.57
SHM1YBR263W MFG1Q07684 458 aa5.26□□□□□ -1.57
SHM1YBR263W YOR019WQ99248 730 aa5.26□□□□□ -1.57
SHM1YBR263W CDC31P06704 161 aaKnown RBP5.25□□□□□ -1.57
SHM1YBR263W URA4P20051 364 aa5.25□□□□□ -1.57
SHM1YBR263W REC107P21651 314 aa5.25□□□□□ -1.57
SHM1YBR263W APN1P22936 367 aa5.25□□□□□ -1.57
SHM1YBR263W TFC1P32367 649 aa5.25□□□□□ -1.57
SHM1YBR263W PDR3P33200 976 aa5.25□□□□□ -1.57
SHM1YBR263W PEX6P33760 1030 aa5.25□□□□□ -1.57
SHM1YBR263W YHR218WP38899 603 aa5.25□□□□□ -1.57
SHM1YBR263W DSS1P39112 969 aa5.25□□□□□ -1.57
SHM1YBR263W ECM10P39987 644 aa5.25□□□□□ -1.57
SHM1YBR263W FAU1P40099 211 aa5.25□□□□□ -1.57
SHM1YBR263W JEM1P40358 645 aa5.25□□□□□ -1.57
SHM1YBR263W LYS12P40495 371 aaKnown RBP5.25□□□□□ -1.57
SHM1YBR263W ARF3P40994 183 aaRIP-Chip data5.25□□□□□ -1.57not detected
SHM1YBR263W NOP9P47077 666 aaKnown RBP5.25□□□□□ -1.57
SHM1YBR263W PMT3P47190 753 aa5.25□□□□□ -1.57
SHM1YBR263W PAC10P48363 199 aa5.25□□□□□ -1.57
SHM1YBR263W GPI1P53306 609 aa5.25□□□□□ -1.57
SHM1YBR263W OAZ1Q02803 292 aa5.25□□□□□ -1.57
SHM1YBR263W YMR310CQ04867 317 aaPredicted RBP5.25□□□□□ -1.57
SHM1YBR263W SPC2Q04969 178 aa5.25□□□□□ -1.57
SHM1YBR263W ARR1Q06596 294 aa5.25□□□□□ -1.57
SHM1YBR263W YTM1Q12024 460 aaPredicted RBP5.25□□□□□ -1.57
SHM1YBR263W BSC1Q12140 328 aa5.25□□□□□ -1.57
SHM1YBR263W ADF1Q2V2Q1 113 aa5.25□□□□□ -1.57
SHM1YBR263W SLH1P53327 1967 aaKnown RBP5.25□□□□□ -1.57
SHM1YBR263W MSS18P08593 268 aa5.24□□□□□ -1.57
SHM1YBR263W DPH5P32469 300 aaPredicted RBP5.24□□□□□ -1.57
SHM1YBR263W MKK1P32490 508 aa5.24□□□□□ -1.57
SHM1YBR263W PDX3P38075 228 aaKnown RBP5.24□□□□□ -1.57
SHM1YBR263W UTP25P40498 721 aaKnown RBP5.24□□□□□ -1.57
SHM1YBR263W ICE2P40499 491 aa5.24□□□□□ -1.57
SHM1YBR263W GNP1P48813 663 aa5.24□□□□□ -1.57
SHM1YBR263W UBC9P50623 157 aaPredicted RBP5.24□□□□□ -1.57
SHM1YBR263W SLI1P53304 468 aa5.24□□□□□ -1.57
SHM1YBR263W IGO1P53897 168 aa5.24□□□□□ -1.57
SHM1YBR263W SNP1Q00916 300 aaPredicted RBP5.24□□□□□ -1.57
SHM1YBR263W NAN1Q02931 896 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms