RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W APC2Q12440 853 aa2.74□□□□□ -1.97
SWD3YBR175W YPR1Q12458 312 aa2.74□□□□□ -1.97
SWD3YBR175W GDH1P07262 454 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W RNA1P11745 407 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W CLN3P13365 580 aa2.73□□□□□ -1.97
SWD3YBR175W CDC23P16522 626 aa2.73□□□□□ -1.97
SWD3YBR175W GPI12P23797 304 aa2.73□□□□□ -1.97
SWD3YBR175W SNC1P31109 117 aa2.73□□□□□ -1.97
SWD3YBR175W DEG1P31115 442 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W PRO3P32263 286 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W YMC1P32331 307 aa2.73□□□□□ -1.97
SWD3YBR175W ASF2P32448 525 aaPredicted RBP2.73□□□□□ -1.97
SWD3YBR175W UTR4P32626 227 aa2.73□□□□□ -1.97
SWD3YBR175W SKN1P33336 771 aa2.73□□□□□ -1.97
SWD3YBR175W YKR015CP36111 568 aa2.73□□□□□ -1.97
SWD3YBR175W DSE1P40077 573 aa2.73□□□□□ -1.97
SWD3YBR175W LCP5P40079 357 aaPredicted RBP2.73□□□□□ -1.97
SWD3YBR175W MMF1P40185 145 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W YJL070CP40361 888 aa2.73□□□□□ -1.97
SWD3YBR175W SHQ1P40486 507 aaPredicted RBP2.73□□□□□ -1.97
SWD3YBR175W FMC1P40491 155 aa2.73□□□□□ -1.97
SWD3YBR175W LYS12P40495 371 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W UTP25P40498 721 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W FMP33P46998 180 aa2.73□□□□□ -1.97
SWD3YBR175W HMS2P47175 358 aa2.73□□□□□ -1.97
SWD3YBR175W PGA2P53903 129 aa2.73□□□□□ -1.97
SWD3YBR175W MPS1P54199 764 aa2.73□□□□□ -1.97
SWD3YBR175W MMT1Q03218 510 aa2.73□□□□□ -1.97
SWD3YBR175W ARP10Q04549 284 aa2.73□□□□□ -1.97
SWD3YBR175W IVY1Q04934 453 aa2.73□□□□□ -1.97
SWD3YBR175W COX20Q04935 205 aa2.73□□□□□ -1.97
SWD3YBR175W SSQ1Q05931 657 aaPredicted RBP2.73□□□□□ -1.97
SWD3YBR175W DIC1Q06143 298 aa2.73□□□□□ -1.97
SWD3YBR175W CTS2Q06350 511 aa2.73□□□□□ -1.97
SWD3YBR175W ASA1Q06822 443 aa2.73□□□□□ -1.97
SWD3YBR175W SSK1Q07084 712 aa2.73□□□□□ -1.97
SWD3YBR175W LDS2Q08218 356 aa2.73□□□□□ -1.97
SWD3YBR175W REX4Q08237 289 aa2.73□□□□□ -1.97
SWD3YBR175W BSC6Q08280 497 aa2.73□□□□□ -1.97
SWD3YBR175W BTS1Q12051 335 aa2.73□□□□□ -1.97
SWD3YBR175W RDL1Q12305 139 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W PRP46Q12417 451 aaPredicted RBP2.73□□□□□ -1.97
SWD3YBR175W RRP12Q12754 1228 aaKnown RBP2.73□□□□□ -1.97
SWD3YBR175W RGS2Q99188 309 aa2.73□□□□□ -1.97
SWD3YBR175W GAL4P04386 881 aa2.72□□□□□ -1.97
SWD3YBR175W ARF1P11076 181 aaKnown RBP2.72□□□□□ -1.97
SWD3YBR175W CKI1P20485 582 aa2.72□□□□□ -1.97
SWD3YBR175W YCR016WP25617 290 aaKnown RBP2.72□□□□□ -1.97
SWD3YBR175W CSM1P25651 190 aa2.72□□□□□ -1.97
SWD3YBR175W RPL5P26321 297 aaKnown RBP2.72□□□□□ -1.97
SWD3YBR175W BUB3P26449 341 aa2.72□□□□□ -1.97
SWD3YBR175W PEX2P32800 271 aa2.72□□□□□ -1.97
SWD3YBR175W ARC19P33204 171 aaKnown RBP2.72□□□□□ -1.97
SWD3YBR175W YKL097CP34245 136 aa2.72□□□□□ -1.97
SWD3YBR175W DOA1P36037 715 aa2.72□□□□□ -1.97
SWD3YBR175W SBE22P38814 852 aa2.72□□□□□ -1.97
SWD3YBR175W YMR134WP40207 237 aa2.72□□□□□ -1.97
SWD3YBR175W OTU1P43558 301 aa2.72□□□□□ -1.97
SWD3YBR175W YJL118WP47022 219 aa2.72□□□□□ -1.97
SWD3YBR175W TOS2P50078 622 aa2.72□□□□□ -1.97
SWD3YBR175W PHB2P50085 310 aa2.72□□□□□ -1.97
SWD3YBR175W YGR168CP53293 376 aa2.72□□□□□ -1.97
SWD3YBR175W FMP30Q02883 468 aa2.72□□□□□ -1.97
SWD3YBR175W SLD5Q03406 294 aa2.72□□□□□ -1.97
SWD3YBR175W SHS1Q07657 551 aa2.72□□□□□ -1.97
SWD3YBR175W YOL075CQ08234 1294 aa2.72□□□□□ -1.97
SWD3YBR175W PFA4Q12006 378 aa2.72□□□□□ -1.97
SWD3YBR175W UBA3Q99344 299 aa2.72□□□□□ -1.97
SWD3YBR175W SSK22P25390 1331 aaPredicted RBP2.71□□□□□ -1.98
SWD3YBR175W CDC36P06100 191 aaPredicted RBP2.71□□□□□ -1.98
SWD3YBR175W MSF1P08425 469 aa2.71□□□□□ -1.98
SWD3YBR175W MAS2P11914 482 aa2.71□□□□□ -1.98
SWD3YBR175W POL30P15873 258 aaKnown RBP2.71□□□□□ -1.98
SWD3YBR175W PRP16P15938 1071 aaPredicted RBP2.71□□□□□ -1.98
SWD3YBR175W YCR007CP25354 239 aa2.71□□□□□ -1.98
SWD3YBR175W MXR2P25566 168 aa2.71□□□□□ -1.98
SWD3YBR175W CWP1P28319 239 aa2.71□□□□□ -1.98
SWD3YBR175W EFB1P32471 206 aaKnown RBP2.71□□□□□ -1.98
SWD3YBR175W KRE6P32486 720 aa2.71□□□□□ -1.98
SWD3YBR175W MGM101P32787 269 aaKnown RBP2.71□□□□□ -1.98
SWD3YBR175W SKG6P32900 734 aaPredicted RBP2.71□□□□□ -1.98
SWD3YBR175W YKL162CP36052 402 aa2.71□□□□□ -1.98
SWD3YBR175W YBR056WP38081 501 aa2.71□□□□□ -1.98
SWD3YBR175W VRG4P40107 337 aa2.71□□□□□ -1.98
SWD3YBR175W BTT1P40314 149 aaPredicted RBP2.71□□□□□ -1.98
SWD3YBR175W SCD6P45978 349 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98 RIP-Chip
SWD3YBR175W YGR117CP53270 476 aa2.71□□□□□ -1.98
SWD3YBR175W SPP2Q02521 185 aa2.71□□□□□ -1.98
SWD3YBR175W NUP100Q02629 959 aa2.71□□□□□ -1.98
SWD3YBR175W MRPS17Q03246 237 aaPredicted RBP2.71□□□□□ -1.98
SWD3YBR175W GTO3Q04806 366 aa2.71□□□□□ -1.98
SWD3YBR175W BSP1Q06604 576 aa2.71□□□□□ -1.98
SWD3YBR175W YLR111WQ12528 110 aa2.71□□□□□ -1.98
SWD3YBR175W TDH3P00359 332 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
SWD3YBR175W TPK3P05986 398 aa2.7□□□□□ -1.98
SWD3YBR175W RAD7P06779 565 aa2.7□□□□□ -1.98
SWD3YBR175W FRS2P15625 503 aaKnown RBP2.7□□□□□ -1.98
SWD3YBR175W RVS161P25343 265 aaKnown RBP2.7□□□□□ -1.98
SWD3YBR175W ZUO1P32527 433 aaKnown RBP2.7□□□□□ -1.98
SWD3YBR175W COX13P32799 129 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms