RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PDCP20941 246 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 OSBPP22059 807 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 HOXD10P28358 340 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 OAS2P29728 719 aaKnown RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 MARCKSP29966 332 aaPredicted RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 KRT2P35908 639 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 ADCY7P51828 1080 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 KRT72Q14CN4 511 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 PPP2R5BQ15173 497 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 TSR1Q2NL82 804 aaKnown RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 ZCCHC8Q6NZY4 707 aaKnown RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 IFNL1Q8IU54 200 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 ANKRD35Q8N283 1001 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 WASF1Q92558 559 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 KAT2BQ92831 832 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 CAPS2Q9BXY5 557 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 MUC3BQ9H195 1237 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 PAPPA2Q9BXP8 1791 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 RRM1P23921 792 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 MCM7P33993 719 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 RCAN1P53805 252 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 FAM81AQ8TBF8 368 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 C12orf42Q96LP6 360 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 MOV10L1Q9BXT6 1211 aaKnown RBP13.28□□□□□ -0.28
SRRT-216ENST00000618262 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 HOMER3Q9NSC5 361 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 LMBRD1Q9NUN5 540 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 COL20A1Q9P218 1284 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 PHIPQ8WWQ0 1821 aa13.28□□□□□ -0.28
SRRT-216ENST00000618262 CLNS1AP54105 237 aaKnown RBP13.27□□□□□ -0.28
SRRT-216ENST00000618262 LONRF1Q17RB8 773 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 FAM117BQ6P1L5 589 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 HPS3Q969F9 1004 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 RSRC1Q96IZ7 334 aaKnown RBP13.27□□□□□ -0.28
SRRT-216ENST00000618262 C16orf45Q96MC5 204 aaPredicted RBP13.27□□□□□ -0.28
SRRT-216ENST00000618262 SPATC1LQ9H0A9 340 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 TMCC3Q9ULS5 477 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 PCDHA6Q9UN73 950 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 PCDHA8Q9Y5H6 950 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 CLIC4Q9Y696 253 aa13.27□□□□□ -0.28
SRRT-216ENST00000618262 ICAM1P05362 532 aa13.27□□□□□ -0.29
SRRT-216ENST00000618262 RPS6P62753 249 aaKnown RBP13.27□□□□□ -0.29
SRRT-216ENST00000618262 TMC6Q7Z403 805 aa13.27□□□□□ -0.29
SRRT-216ENST00000618262 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.29
SRRT-216ENST00000618262 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
SRRT-216ENST00000618262 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■■■□□ 15.7
SRRT-216ENST00000618262 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
SRRT-216ENST00000618262 ADCY5O95622 1261 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 FGFR1OPO95684 399 aaKnown RBP13.26□□□□□ -0.29
SRRT-216ENST00000618262 MYCLP12524 364 aaPredicted RBP13.26□□□□□ -0.29
SRRT-216ENST00000618262 MIPOL1Q8TD10 442 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 TEX13BQ9BXU2 312 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 C6orf50Q9HD87 102 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 CLCN2P51788 898 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 LBX2Q6XYB7 198 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 TBCKQ8TEA7 893 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 CUL5Q93034 780 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 STK36Q9NRP7 1315 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 NID2Q14112 1375 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 MEIS2O14770 477 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 ATP8B1O43520 1251 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 CNMDO75829 334 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 NT5C2P49902 561 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 ERVK-9P63128 1117 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 ERVK-24P63145 666 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 RESTQ13127 1097 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 NOSTRINQ8IVI9 506 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 CLIP3Q96DZ5 547 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 MTMR8Q96EF0 704 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 TRIM4Q9C037 500 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 COMMD8Q9NX08 183 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 ADAM21Q9UKJ8 722 aa13.26□□□□□ -0.29
SRRT-216ENST00000618262 ANKRD65E5RJM6 399 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 CDC25AP30304 524 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 HOXA7P31268 230 aaPredicted RBP13.25□□□□□ -0.29
SRRT-216ENST00000618262 CLCN6P51797 869 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 MTHFD1LQ6UB35 978 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 LMNTD2Q8IXW0 634 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 REPS2Q8NFH8 660 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 CLEC4DQ8WXI8 215 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 TAAR1Q96RJ0 339 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 CD248Q9HCU0 757 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 MYH6P13533 1939 aa13.25□□□□□ -0.29
SRRT-216ENST00000618262 CCNT1O60563 726 aaKnown RBP13.25□□□□□ -0.29
SRRT-216ENST00000618262 PRPF40AO75400 957 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms