RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 STXBP3O00186 592 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 MPHOSPH10O00566 681 aaKnown RBP6.57□□□□□ -1.36
SF3B3-210ENST00000567654 YEATS4O95619 227 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SNHG28P0DPA3 235 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SCG2P13521 617 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 MARCKSP29966 332 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-210ENST00000567654 NT5C2P49902 561 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 FCGRTP55899 365 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SNW1Q13573 536 aaKnown RBP6.57□□□□□ -1.36
SF3B3-210ENST00000567654 TRIM29Q14134 588 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SEPT2Q15019 361 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SETDB1Q15047 1291 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 PPP2R5BQ15173 497 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 STK38Q15208 465 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 DLGAP5Q15398 846 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 CCDC178Q5BJE1 867 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 AXDND1Q5T1B0 1012 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-210ENST00000567654 TTBK2Q6IQ55 1244 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 NOSTRINQ8IVI9 506 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 CCAR1Q8IX12 1150 aaKnown RBP6.57□□□□□ -1.36
SF3B3-210ENST00000567654 FSIP1Q8NA03 581 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 GALNT11Q8NCW6 608 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 AGBL3Q8NEM8 1001 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 ENGASEQ8NFI3 743 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 BICD2Q8TD16 824 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 RASGRP4Q8TDF6 673 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 SLC7A3Q8WY07 619 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 WASF1Q92558 559 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 CLIC6Q96NY7 704 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 TMEM39BQ9GZU3 492 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 UBA5Q9GZZ9 404 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 ADAM19Q9H013 955 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 FOXP1Q9H334 677 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF287Q9HBT7 754 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 CLIP2Q9UDT6 1046 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 PPME1Q9Y570 386 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 PCDHB6Q9Y5E3 794 aa6.57□□□□□ -1.36
SF3B3-210ENST00000567654 A0A087WWV3 80 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 A0A1B0GVL5 298 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 A0A1W2PRG0 241 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 KLRF2D3W0D1 207 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 FZD9O00144 591 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 WNT10BO00744 389 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 SPTLC2O15270 562 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 PPP1R11O60927 126 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 TTLL1O95922 423 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 PARP1P09874 1014 aaKnown RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 EEF2P13639 858 aaKnown RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 TAL1P17542 331 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 KIF5BP33176 963 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 KRT2P35908 639 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 ME1P48163 572 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 GMPSP49915 693 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 AKAP17AQ02040 695 aaKnown RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 SLC39A14Q15043 492 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 CAMK4Q16566 473 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 CERKLQ49MI3 558 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 ATL3Q6DD88 541 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 ALG1LQ6GMV1 187 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 SHC4Q6S5L8 630 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 RBM43Q6ZSC3 357 aaKnown RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 CCDC84Q86UT8 332 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 FMR1NBQ8N0W7 255 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 GIPC2Q8TF65 315 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 FAM151AQ8WW52 585 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 BSNDQ8WZ55 320 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 PIGSQ96S52 555 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 SPZ1Q9BXG8 430 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 DHX36Q9H2U1 1008 aaKnown RBP6.56□□□□□ -1.36
SF3B3-210ENST00000567654 CLSTN2Q9H4D0 955 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 VEZTQ9HBM0 779 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 VAT1LQ9HCJ6 419 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 CABP5Q9NP86 173 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 MYOZ2Q9NPC6 264 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 PI4KBQ9UBF8 816 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 SSC5DA1L4H1 1573 aa6.56□□□□□ -1.36
SF3B3-210ENST00000567654 KRBA1A5PL33 1030 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 SOX1O00570 391 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 DDX3YO15523 660 aaKnown RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 GH2P01242 217 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 SLC16A2P36021 539 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 MRE11P49959 708 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF157P51786 506 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 NDUFA8P51970 172 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF280AP59817 542 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF543Q08ER8 600 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 KCNMA1Q12791 1236 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 GNL2Q13823 731 aaKnown RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 KIAA1755Q5JYT7 1200 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 SPECC1Q5M775 1068 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 ADALQ6DHV7 355 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 KCTD1Q719H9 257 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 FOXP4Q8IVH2 680 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms