RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 CDKL2Q92772 493 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 DYDC2Q96IM9 177 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 MSTO1Q9BUK6 570 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 PARD6BQ9BYG5 372 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 CASZ1Q86V15 1759 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 C3P01024 1663 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 TRIM49BA6NDI0 452 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 POTEMA6NI47 508 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 INO80B-WBP1J3KQ70 363 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 NR3C1P04150 777 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 EIF2AK2P19525 551 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 CNGA1P29973 690 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SFNP31947 248 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 CXCR5P32302 372 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 PEX3P56589 373 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 KCNB1Q14721 858 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 TBC1D10BQ4KMP7 808 aaPredicted RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 ANKRD20A3Q5VUR7 823 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SDCCAG8Q86SQ7 713 aaPredicted RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 INO80BQ9C086 356 aaPredicted RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 BHMT2Q9H2M3 363 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 IL9RQ01113 521 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SNX1Q13596 522 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 TXNRD1Q16881 649 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 KNOP1Q1ED39 458 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SFR1Q86XK3 245 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 NME8Q8N427 588 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SRBD1Q8N5C6 995 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 KCTD6Q8NC69 237 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 VCXQ9H320 206 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 TDRD3Q9H7E2 651 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 CNOT10Q9H9A5 744 aaKnown RBP7.49□□□□□ -1.21
AP4E1-203ENST00000560508 SCINQ9Y6U3 715 aa7.49□□□□□ -1.21
AP4E1-203ENST00000560508 PDS5AQ29RF7 1337 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SH3BP5O60239 455 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SLMAPQ14BN4 828 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 NAALADL2Q58DX5 795 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 BSPRYQ5W0U4 402 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 RNF10Q8N5U6 811 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 LRRC8CQ8TDW0 803 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 FAM167AQ96KS9 214 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 MTRQ99707 1265 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 AKAP12Q02952 1782 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 CCDC151A5D8V7 595 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SNAP23O00161 211 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 ARHGAP4P98171 946 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 DR1Q01658 176 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 PDIA6Q15084 440 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 PHLDB2Q86SQ0 1253 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SLC44A5Q8NCS7 719 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 NEDD1Q8NHV4 660 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 PIGOQ8TEQ8 1089 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 CFAP57Q96MR6 1250 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 APOL6Q9BWW8 343 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 TUFT1Q9NNX1 390 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 HOXC10Q9NYD6 342 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 HERC5Q9UII4 1024 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SPATA31A6Q5VVP1 1343 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 WDR64B1ANS9 1081 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 PCK1P35558 622 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 TFAMQ00059 246 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 TNFAIP2Q03169 654 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SCYL1Q96KG9 808 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 SLC38A10Q9HBR0 1119 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 PFDN6O15212 129 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 IRX4P78413 519 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 NFIXQ14938 502 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 STXBP2Q15833 593 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 RPUSD2Q8IZ73 545 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 VCX3BQ9H321 246 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 RAVER2Q9HCJ3 691 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 GRID2IPA4D2P6 1211 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 PALMO75781 387 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 INHBAP08476 426 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 RFX1P22670 979 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 RFX5P48382 616 aaPredicted RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 CACNB3P54284 484 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 EIF3BP55884 814 aaKnown RBP7.48□□□□□ -1.21
AP4E1-203ENST00000560508 KRT76Q01546 638 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 ITKQ08881 620 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 TRIM42Q8IWZ5 723 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 RNF169Q8NCN4 708 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 MCPH1Q8NEM0 835 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 FBXO40Q9UH90 709 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 DNAJC12Q9UKB3 198 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 FLT1P17948 1338 aa7.48□□□□□ -1.21
AP4E1-203ENST00000560508 A0A1W2PQC6 194 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 ARHGEF37A1IGU5 675 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 MAP3K14Q99558 947 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 SYNGAP1Q96PV0 1343 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 GOLGA8IPA6NC78 632 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 GOLGA8JA6NMD2 632 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 GUCY1A2P33402 732 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 CLCN6P51797 869 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 PPARDQ03181 441 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 MAP3K21Q5TCX8 1036 aa7.47□□□□□ -1.21
AP4E1-203ENST00000560508 C16orf86Q6ZW13 317 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms