RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TXKP42681 527 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 QARSP47897 775 aaKnown RBP15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 TOB1P50616 345 aaPredicted RBP15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 PDIA5Q14554 519 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 ZNF174Q15697 407 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 XKR3Q5GH77 459 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 HAUS3Q68CZ6 603 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 RSPH3Q86UC2 560 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 EXOC8Q8IYI6 725 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 LMBR1Q8WVP7 490 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 TUBE1Q9UJT0 475 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 ZMYND8Q9ULU4 1186 aaPredicted RBP15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 MTMR6Q9Y217 621 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 ZDHHC9Q9Y397 364 aa15.7■□□□□ 0.1
PKNOX1-209ENST00000560448 WNT7AO00755 349 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 MAGEB2O15479 319 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 OATP04181 439 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 INSRRP14616 1297 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 PTGDRQ13258 359 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 PPIGQ13427 754 aaKnown RBP eCLIP15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 SH3RF1Q7Z6J0 888 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 C4orf19Q8IY42 314 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 KCTD17Q8N5Z5 321 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 GDF15Q99988 308 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 TMEM60Q9H2L4 133 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 ZSWIM4Q9H7M6 989 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 SETD4Q9NVD3 440 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 MORC2Q9Y6X9 1032 aaPredicted RBP15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 WDR81Q562E7 1941 aa15.69■□□□□ 0.1
PKNOX1-209ENST00000560448 LYPLA2O95372 231 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 SYN1P17600 705 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 FPGSQ05932 587 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 PKP1Q13835 747 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 NCAPH2Q6IBW4 605 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 RPUSD2Q8IZ73 545 aaKnown RBP15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 NME8Q8N427 588 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 GJA10Q969M2 543 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 CTAGE1Q96RT6 745 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 JPH2Q9BR39 696 aaPredicted RBP15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 NIFKQ9BYG3 293 aaKnown RBP15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 PCDHA2Q9Y5H9 948 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 SMIM35A0A1B0GVV1 85 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 EML1O00423 815 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 TREHO43280 583 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 CYP2C9P11712 490 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 XRCC6P12956 609 aaKnown RBP eCLIP15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 SELPP16109 830 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 ATP4AP20648 1035 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 MAGEA10P43363 369 aaPredicted RBP15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 PRKCEQ02156 737 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 DTHD1Q6ZMT9 781 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 OTUD6AQ7L8S5 288 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 UIMC1Q96RL1 719 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 HSD17B14Q9BPX1 270 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 TUFT1Q9NNX1 390 aa15.68■□□□□ 0.1
PKNOX1-209ENST00000560448 SLC26A4O43511 780 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 ZNF862O60290 1169 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 IQCF3P0C7M6 154 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 TMOD1P28289 359 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 TECP42680 631 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 RESTQ13127 1097 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 MARCH8Q5T0T0 291 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 ATL3Q6DD88 541 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 IGSF22Q8N9C0 903 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 BADQ92934 168 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 AK8Q96MA6 479 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 GBP4Q96PP9 640 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 LXNQ9BS40 222 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 POLR3CQ9BUI4 534 aaPredicted RBP15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 PPP1R12CQ9BZL4 782 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 TANC1Q9C0D5 1861 aa15.67■□□□□ 0.1
PKNOX1-209ENST00000560448 GAS2O43903 313 aaKnown RBP15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 BRD1O95696 1058 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 CKBP12277 381 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 RPA1P27694 616 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 TRIM71Q2Q1W2 868 aaKnown RBP15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 IER5Q5VY09 327 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 PSRC1Q6PGN9 363 aaPredicted RBP15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 MTHFD1LQ6UB35 978 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 LRRC8DQ7L1W4 858 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 DHX38Q92620 1227 aaKnown RBP15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 UBE2OQ9C0C9 1292 aaKnown RBP15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 PRO3102Q9H379 93 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 SQORQ9Y6N5 450 aa15.66■□□□□ 0.1
PKNOX1-209ENST00000560448 POTEMA6NI47 508 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 M0QZ92 97 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 ZSCAN22P10073 491 aaPredicted RBP15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 ITGB8P26012 769 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 KLRC1P26715 233 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 MDM2Q00987 491 aaPredicted RBP15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 TBC1D8BQ0IIM8 1120 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 HIC1Q14526 733 aa15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 TARBP2Q15633 366 aaKnown RBP15.65■□□□□ 0.1
PKNOX1-209ENST00000560448 UGCGQ16739 394 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms