RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 BLOC1S4Q9NUP1 217 aa16.84■□□□□ 0.29
AP4E1-202ENST00000558439 IFT88Q13099 833 aa16.83■□□□□ 0.29
AP4E1-202ENST00000558439 ORC2Q13416 577 aaPredicted RBP16.83■□□□□ 0.29
AP4E1-202ENST00000558439 DPH6Q7L8W6 267 aa16.83■□□□□ 0.29
AP4E1-202ENST00000558439 C4orf32Q8N8J7 132 aa16.83■□□□□ 0.29
AP4E1-202ENST00000558439 NACC1Q96RE7 527 aa16.83■□□□□ 0.29
AP4E1-202ENST00000558439 KCPQ6ZWJ8 1503 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
AP4E1-202ENST00000558439 SLC18A3Q16572 532 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 ZNF746Q6NUN9 644 aaPredicted RBP16.83■□□□□ 0.28
AP4E1-202ENST00000558439 GJB7Q6PEY0 223 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 EIF2AK1Q9BQI3 630 aaKnown RBP16.83■□□□□ 0.28
AP4E1-202ENST00000558439 PACSIN1Q9BY11 444 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 RAB17Q9H0T7 212 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 PLAAQ9Y263 795 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 TARSL2A2RTX5 802 aaKnown RBP16.83■□□□□ 0.28
AP4E1-202ENST00000558439 SEMA3FQ13275 785 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 AP3B2Q13367 1082 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 VPS72Q15906 364 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 SP8Q8IXZ3 490 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 SCLT1Q96NL6 688 aa16.83■□□□□ 0.28
AP4E1-202ENST00000558439 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
AP4E1-202ENST00000558439 REXO2Q9Y3B8 237 aaKnown RBP16.83■□□□□ 0.28
AP4E1-202ENST00000558439 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 NDUFB10O96000 172 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 NR1D1P20393 614 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 KCTD19Q17RG1 926 aaPredicted RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 ZC2HC1CQ53FD0 456 aaPredicted RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 PAPD7Q5XG87 772 aaKnown RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 DENND2CQ68D51 928 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 SCAF8Q9UPN6 1271 aaKnown RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 ESYT2A0FGR8 921 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 BUB1BO60566 1050 aaPredicted RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 C5P01031 1676 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 GAP43P17677 238 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 LMNB1P20700 586 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 USP11P51784 963 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 AOC3Q16853 763 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 ALS2CLQ60I27 953 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 MCTP2Q6DN12 878 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 JDP2Q8WYK2 163 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 NOVA2Q9UNW9 492 aaKnown RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 PDE2AO00408 941 aaPredicted RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 MED24O75448 989 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 UCHL3P15374 230 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 SLCO1A2P46721 670 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 PPP1R18Q6NYC8 613 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 DDX42Q86XP3 938 aaKnown RBP eCLIP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 CATSPER3Q86XQ3 398 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 DDX4Q9NQI0 724 aaKnown RBP16.82■□□□□ 0.28
AP4E1-202ENST00000558439 AMACRQ9UHK6 382 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
AP4E1-202ENST00000558439 TNNI1P19237 187 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 GBP2P32456 591 aaPredicted RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 GCLMP48507 274 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 PTK2Q05397 1052 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 MTMR3Q13615 1198 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 FMNL3Q8IVF7 1028 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 MTMR8Q96EF0 704 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 RIOX1Q9H6W3 641 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 A0A1W2PQJ5 194 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 SSU72P8A0A1W2PR75 194 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 FANCGO15287 622 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 CYP11B2P19099 503 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 IFNAR2P48551 515 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 DRAP1Q14919 205 aaPredicted RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 APTXQ7Z2E3 356 aaKnown RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 ANKS4BQ8N8V4 417 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 KIFAP3Q92845 792 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 GJD4Q96KN9 370 aaPredicted RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 RGS16O15492 202 aaPredicted RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 FGRP09769 529 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 WDR44Q5JSH3 913 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 PBKQ96KB5 322 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 TYW1Q9NV66 732 aaKnown RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 RAB21Q9UL25 225 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 A6NNZ2 444 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 EIF2AK2P19525 551 aaKnown RBP16.81■□□□□ 0.28
AP4E1-202ENST00000558439 TUBB8Q3ZCM7 444 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 KRT27Q7Z3Y8 459 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 PODNQ7Z5L7 613 aa16.81■□□□□ 0.28
AP4E1-202ENST00000558439 ECE2O60344 883 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 GYS1P13807 737 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 ADRA2BP18089 450 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 PSMC6P62333 389 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 WDR93Q6P2C0 686 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 GIMAP7Q8NHV1 300 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 FAM20AQ96MK3 541 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
AP4E1-202ENST00000558439 C21orf2O43822 256 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 SNX1Q13596 522 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 SAMD15Q9P1V8 674 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 ARFGEF2Q9Y6D5 1785 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 GUCY1A3Q02108 690 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 ANKRD42Q8N9B4 389 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms