RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ZNF484Q5JVG2 852 aa15.52■□□□□ 0.08
TUBB3-202ENST00000553656 FOXD4L3Q6VB84 417 aaPredicted RBP15.52■□□□□ 0.08
TUBB3-202ENST00000553656 TPH2Q8IWU9 490 aa15.52■□□□□ 0.08
TUBB3-202ENST00000553656 CCDC43Q96MW1 224 aaKnown RBP15.52■□□□□ 0.08
TUBB3-202ENST00000553656 USP28Q96RU2 1077 aa15.52■□□□□ 0.08
TUBB3-202ENST00000553656 FTOQ9C0B1 505 aaKnown RBP eCLIP15.52■□□□□ 0.08
TUBB3-202ENST00000553656 RGL1Q9NZL6 768 aa15.52■□□□□ 0.08
TUBB3-202ENST00000553656 TUBE1Q9UJT0 475 aa15.52■□□□□ 0.08
TUBB3-202ENST00000553656 ZMYND8Q9ULU4 1186 aaPredicted RBP15.52■□□□□ 0.08
TUBB3-202ENST00000553656 ALPK3Q96L96 1907 aa15.52■□□□□ 0.07
TUBB3-202ENST00000553656 MYH9P35579 1960 aaKnown RBP15.51■□□□□ 0.07
TUBB3-202ENST00000553656 DDX11L8A8MPP1 907 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 ZNF862O60290 1169 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 CYP2C9P11712 490 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 RAG1P15918 1043 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 PTK7Q13308 1070 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 BFSP2Q13515 415 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
TUBB3-202ENST00000553656 KRT79Q5XKE5 535 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 ATL3Q6DD88 541 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 C4orf19Q8IY42 314 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 LBHD1Q9BQE6 289 aaPredicted RBP15.51■□□□□ 0.07
TUBB3-202ENST00000553656 HIPK3Q9H422 1215 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 TUFT1Q9NNX1 390 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 CFAP45Q9UL16 551 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 TBX21Q9UL17 535 aa15.51■□□□□ 0.07
TUBB3-202ENST00000553656 KIAA0355O15063 1070 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 TREHO43280 583 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 SYN1P17600 705 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
TUBB3-202ENST00000553656 ATP4AP20648 1035 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 HOXC8P31273 242 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 CCT6AP40227 531 aaKnown RBP15.5■□□□□ 0.07
TUBB3-202ENST00000553656 ZNF200P98182 395 aaPredicted RBP15.5■□□□□ 0.07
TUBB3-202ENST00000553656 TAF2Q6P1X5 1199 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 OTUD6AQ7L8S5 288 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 RSPH3Q86UC2 560 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 IGSF22Q8N9C0 903 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 RETREG2Q8NC44 543 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 CAGE1Q8TC20 777 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 SNX29Q8TEQ0 813 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 AK8Q96MA6 479 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 HSD17B14Q9BPX1 270 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 TSHZ2Q9NRE2 1034 aa15.5■□□□□ 0.07
TUBB3-202ENST00000553656 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
TUBB3-202ENST00000553656 RBM19Q9Y4C8 960 aaKnown RBP15.5■□□□□ 0.07
TUBB3-202ENST00000553656 MYH15Q9Y2K3 1946 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 SLITRK3O94933 977 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 YEATS4O95619 227 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 RPLP2P05387 115 aaKnown RBP15.49■□□□□ 0.07
TUBB3-202ENST00000553656 RPA1P27694 616 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
TUBB3-202ENST00000553656 YWHABP31946 246 aaKnown RBP15.49■□□□□ 0.07
TUBB3-202ENST00000553656 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
TUBB3-202ENST00000553656 PTPAQ15257 358 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 IL17AQ16552 155 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 MTERF2Q49AM1 385 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 SH3RF1Q7Z6J0 888 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 SERINC5Q86VE9 423 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 RASSF8Q8NHQ8 419 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 TRAPPC12Q8WVT3 735 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 POLR3CQ9BUI4 534 aaPredicted RBP15.49■□□□□ 0.07
TUBB3-202ENST00000553656 PPP1R12CQ9BZL4 782 aa15.49■□□□□ 0.07
TUBB3-202ENST00000553656 CIZ1Q9ULV3 898 aaPredicted RBP15.49■□□□□ 0.07
TUBB3-202ENST00000553656 KDM3AQ9Y4C1 1321 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 KAT6AQ92794 2004 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 MBLAC1A4D2B0 266 aaPredicted RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 TRIM43BA6NCK2 446 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 MAGEB2O15479 319 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 LYPLA2O95372 231 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 TIMP1P01033 207 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 MUTP22033 750 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 KLRC1P26715 233 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 LONP1P36776 959 aaKnown RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 THPOP40225 353 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 UBA7P41226 1012 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 KRT85P78386 507 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 DNM1Q05193 864 aaKnown RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 TBC1D8BQ0IIM8 1120 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 HIC1Q14526 733 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 SLC39A14Q15043 492 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 ZRSR1Q15695 479 aaKnown RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 CATSPER3Q86XQ3 398 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 KCNG4Q8TDN1 519 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 TRIM43Q96BQ3 446 aaPredicted RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 CDK5RAP3Q96JB5 506 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 CEP170P1Q96L14 293 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 NOC4LQ9BVI4 516 aaKnown RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 NIFKQ9BYG3 293 aaKnown RBP15.48■□□□□ 0.07
TUBB3-202ENST00000553656 ZDHHC9Q9Y397 364 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 PPME1Q9Y570 386 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 PCDHA2Q9Y5H9 948 aa15.48■□□□□ 0.07
TUBB3-202ENST00000553656 PP2D1A8MPX8 630 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 H0YGN5 161 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 SPTLC2O15270 562 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 CAND2O75155 1236 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 MED24O75448 989 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 TMOD1P28289 359 aa15.47■□□□□ 0.07
TUBB3-202ENST00000553656 TXLNAP40222 546 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms