RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CHMP2AO43633 222 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 ACTN1P12814 892 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 MARCH8Q5T0T0 291 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 MIER3Q7Z3K6 550 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 BBXQ8WY36 941 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 GJA10Q969M2 543 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 CDX2Q99626 313 aaPredicted RBP17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 GABBR1Q9UBS5 961 aa17.39■□□□□ 0.37
PRPF40B-211ENST00000551063 RSPH10B2B2RC85 870 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 RSPH10BP0C881 870 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 IGBP1P78318 339 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 PPP2R5CQ13362 524 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 ORC2Q13416 577 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 GPNMBQ14956 572 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 ZNF484Q5JVG2 852 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 OTOP2Q7RTS6 562 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 RSPH3Q86UC2 560 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 SLFN12Q8IYM2 578 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 VAV3Q9UKW4 847 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 CEP131Q9UPN4 1083 aa17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.38■□□□□ 0.37
PRPF40B-211ENST00000551063 COL6A3P12111 3177 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 NEMFO60524 1076 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 NBNO60934 754 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 ATP4AP20648 1035 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 MBTPS1Q14703 1052 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 FAM26DQ5JW98 314 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 RUFY4Q6ZNE9 571 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 CKAP2LQ8IYA6 745 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 HAS1Q92839 578 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 FTOQ9C0B1 505 aaKnown RBP eCLIP17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 CXXC1Q9P0U4 656 aaPredicted RBP17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 PCDHA2Q9Y5H9 948 aa17.37■□□□□ 0.37
PRPF40B-211ENST00000551063 SMIM35A0A1B0GVV1 85 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 MARCH6O60337 910 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 BAG4O95429 457 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 OATP04181 439 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 CTSHP09668 335 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 TRAPPC10P48553 1259 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 GNL2Q13823 731 aaKnown RBP17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 CNKSR3Q6P9H4 555 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 NOSTRINQ8IVI9 506 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 TTYH1Q9H313 450 aaPredicted RBP17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 SMC3Q9UQE7 1217 aa17.36■□□□□ 0.37
PRPF40B-211ENST00000551063 ZBBXA8MT70 800 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 ZNF862O60290 1169 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 EFCAB14O75071 495 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 U2AF2P26368 475 aaKnown RBP eCLIP17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 GJB2P29033 226 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 PRKCEQ02156 737 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 CUL4AQ13619 759 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 CALCRLQ16602 461 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 MTHFD1LQ6UB35 978 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 TRAPPC12Q8WVT3 735 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 NOL7Q9UMY1 257 aaKnown RBP17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 SLC4A7Q9Y6M7 1214 aa17.35■□□□□ 0.37
PRPF40B-211ENST00000551063 ZBTB42B2RXF5 422 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 KIF28PB7ZC32 967 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 WNT7AO00755 349 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 MRPS6P82932 125 aaKnown RBP17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 SPIRE1Q08AE8 756 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 MGAT3Q09327 533 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 UGCGQ16739 394 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 NME8Q8N427 588 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 MAFAQ8NHW3 353 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 DNAJB3Q8WWF6 145 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 MYLIPQ8WY64 445 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 SLC9A7Q96T83 725 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 FAM49AQ9H0Q0 323 aaPredicted RBP17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 NRBP2Q9NSY0 501 aa17.34■□□□□ 0.37
PRPF40B-211ENST00000551063 ABHD14A-ACY1A0A1B0GW23 586 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 EML1O00423 815 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 MAGEB2O15479 319 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 C22orf31O95567 290 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 FOSL2P15408 326 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 DNAJB2P25686 324 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 KLRC1P26715 233 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 PSMC5P62195 406 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 EPHA7Q15375 998 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 PLEKHG4Q58EX7 1191 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 XKR3Q5GH77 459 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 PHOSPHO2Q8TCD6 241 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 ZBTB10Q96DT7 871 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 MTMR9Q96QG7 549 aa17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 TRIP12Q14669 1992 aaPredicted RBP17.33■□□□□ 0.36
PRPF40B-211ENST00000551063 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 M0QZ92 97 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 CHRNA1P02708 482 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 QARSP47897 775 aaKnown RBP17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 KCNJ6P48051 423 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 RAB30Q15771 203 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 TTC38Q5R3I4 469 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 IER5Q5VY09 327 aa17.32■□□□□ 0.36
PRPF40B-211ENST00000551063 DBF4BQ8NFT6 615 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms