RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 GLG1Q92896 1179 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 CEP89Q96ST8 783 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 MYH9P35579 1960 aaKnown RBP10.66□□□□□ -0.7
CLK4-209ENST00000521621 IGKV6-21A0A0C4DH24 114 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 PPFIA3O75145 1194 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 INSRRP14616 1297 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 GJB2P29033 226 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLK4-209ENST00000521621 PSMC5P62195 406 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 RILPL1Q5EBL4 403 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 XKR3Q5GH77 459 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 MTHFD1LQ6UB35 978 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 BRAPQ7Z569 592 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 C4orf32Q8N8J7 132 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 ABHD14A-ACY1A0A1B0GW23 586 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 GAS2O43903 313 aaKnown RBP10.65□□□□□ -0.7
CLK4-209ENST00000521621 NEMFO60524 1076 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 FGBP02675 491 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 OATP04181 439 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
CLK4-209ENST00000521621 CYP2C18P33260 490 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 EPHB4P54760 987 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 MDM2Q00987 491 aaPredicted RBP10.65□□□□□ -0.7
CLK4-209ENST00000521621 PDIA5Q14554 519 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 SWSAP1Q6NVH7 229 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 MIER3Q7Z3K6 550 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 SETD4Q9NVD3 440 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 TUBE1Q9UJT0 475 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 MYH15Q9Y2K3 1946 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 TREHO43280 583 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 CYP2C9P11712 490 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 CSF2RAP15509 400 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 PLEKHG4Q58EX7 1191 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 PDXDC2PQ6P474 469 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 TRIM50Q86XT4 487 aa10.65□□□□□ -0.7
CLK4-209ENST00000521621 JPH2Q9BR39 696 aaPredicted RBP10.65□□□□□ -0.7
CLK4-209ENST00000521621 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
CLK4-209ENST00000521621 C22orf31O95567 290 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 BMP15O95972 392 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 FXR1P51114 621 aaKnown RBP eCLIP10.65□□□□□ -0.71
CLK4-209ENST00000521621 SHHQ15465 462 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 CALCRLQ16602 461 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 ODR4Q5SWX8 454 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 POTEDQ86YR6 584 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 SLC9A7Q96T83 725 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 HSD17B14Q9BPX1 270 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.65□□□□□ -0.712e-6■■■□□ 15
CLK4-209ENST00000521621 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.71
CLK4-209ENST00000521621 GABBR1Q9UBS5 961 aa10.65□□□□□ -0.71
CLK4-209ENST00000521621 UMODL1Q5DID0 1318 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 RSPH10B2B2RC85 870 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 RSPH10BP0C881 870 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 QARSP47897 775 aaKnown RBP10.64□□□□□ -0.71
CLK4-209ENST00000521621 TTC38Q5R3I4 469 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 ZNF618Q5T7W0 954 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 ARL6IP4Q66PJ3 421 aaKnown RBP10.64□□□□□ -0.71
CLK4-209ENST00000521621 ANKEF1Q9NU02 776 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 PKD2L1Q9P0L9 805 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 PTPRSQ13332 1948 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
CLK4-209ENST00000521621 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
CLK4-209ENST00000521621 FAM205CA6NFA0 338 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 KIF28PB7ZC32 967 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 ZNF862O60290 1169 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 RFC5P40937 340 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 MRPS6P82932 125 aaKnown RBP10.64□□□□□ -0.71
CLK4-209ENST00000521621 IER5Q5VY09 327 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 WNT8BQ93098 351 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 PPP1R12CQ9BZL4 782 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 RNF216Q9NWF9 866 aaPredicted RBP10.64□□□□□ -0.71
CLK4-209ENST00000521621 PCDHA12Q9UN75 941 aa10.64□□□□□ -0.71
CLK4-209ENST00000521621 SCN5AQ14524 2016 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 KAT6AQ92794 2004 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 PDE4DIPQ5VU43 2346 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 BACH1O14867 736 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 NBNO60934 754 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 OR52Z1P0C646 297 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 TOB1P50616 345 aaPredicted RBP10.63□□□□□ -0.71
CLK4-209ENST00000521621 ZSWIM4Q9H7M6 989 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 DBR1Q9UK59 544 aaKnown RBP10.63□□□□□ -0.71
CLK4-209ENST00000521621 TRPC6Q9Y210 931 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 CENPFP49454 3210 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 TRIP12Q14669 1992 aaPredicted RBP10.63□□□□□ -0.71
CLK4-209ENST00000521621 MAFO75444 373 aaPredicted RBP10.63□□□□□ -0.71
CLK4-209ENST00000521621 ZNF200P98182 395 aaPredicted RBP10.63□□□□□ -0.71
CLK4-209ENST00000521621 PRKCEQ02156 737 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 POU5F1BQ06416 359 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 MBTPS1Q14703 1052 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 ZNF365Q70YC5 407 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 IGSF22Q8N9C0 903 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 RSPH1Q8WYR4 309 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 TRPV2Q9Y5S1 764 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 MICAL3Q7RTP6 2002 aa10.63□□□□□ -0.71
CLK4-209ENST00000521621 SORBS3O60504 671 aa10.62□□□□□ -0.71
CLK4-209ENST00000521621 PCBP1Q15365 356 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLK4-209ENST00000521621 RAB30Q15771 203 aa10.62□□□□□ -0.71
CLK4-209ENST00000521621 C9orf50Q5SZB4 431 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms