RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 KDM3AQ9Y4C1 1321 aa10.58□□□□□ -0.71
MSH3-203ENST00000512531 ZBTB5O15062 677 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 ARHGAP6O43182 974 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 KIF20AO95235 890 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 IGHA2P01877 340 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 SNHG28P0DPA3 235 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 SYN1P17600 705 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 PBX2P40425 430 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 ZNF543Q08ER8 600 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 NPY5RQ15761 445 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 CALCRLQ16602 461 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 LRRC26Q2I0M4 334 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 LETM2Q2VYF4 491 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 KRT79Q5XKE5 535 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 CEP135Q66GS9 1140 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 CATSPERGQ6ZRH7 1159 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 CABP7Q86V35 215 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 LPAR1Q92633 364 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 PIGSQ96S52 555 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 EHMT1Q9H9B1 1298 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 VAT1LQ9HCJ6 419 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 RIC8AQ9NPQ8 531 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 FANCLQ9NW38 375 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 NRBP1Q9UHY1 535 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 PYCARDQ9ULZ3 195 aa10.58□□□□□ -0.72
MSH3-203ENST00000512531 IGKV6D-41A0A0C4DH26 115 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 SMIM22K7EJ46 135 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 M0R2N6 131 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 STRNO43815 780 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 RRP9O43818 475 aaKnown RBP10.57□□□□□ -0.72
MSH3-203ENST00000512531 STX10O60499 249 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 CNMDO75829 334 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 GDF11O95390 407 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 FOSP01100 380 aaPredicted RBP10.57□□□□□ -0.72
MSH3-203ENST00000512531 GH2P01242 217 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 RPN1P04843 607 aaKnown RBP10.57□□□□□ -0.72
MSH3-203ENST00000512531 GOLGA8HP0CJ92 632 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 AKR1B1P15121 316 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 JUNDP17535 347 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 CCND3P30281 292 aaPredicted RBP10.57□□□□□ -0.72
MSH3-203ENST00000512531 SLC1A4P43007 532 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 AP3B2Q13367 1082 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 GRB14Q14449 540 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 PDIA5Q14554 519 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 SEPT2Q15019 361 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 SYCP1Q15431 976 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 CNGA4Q8IV77 575 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 MKL1Q969V6 931 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 DHTKD1Q96HY7 919 aaPredicted RBP10.57□□□□□ -0.72
MSH3-203ENST00000512531 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 NT5C3AQ9H0P0 336 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 ARHGEF10LQ9HCE6 1279 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 EXOC1Q9NV70 894 aa10.57□□□□□ -0.72
MSH3-203ENST00000512531 DDX20Q9UHI6 824 aaKnown RBP10.57□□□□□ -0.72
MSH3-203ENST00000512531 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 DNM1LO00429 736 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 CYTH3O43739 400 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 EEF1GP26641 437 aaKnown RBP10.56□□□□□ -0.72
MSH3-203ENST00000512531 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
MSH3-203ENST00000512531 SCNN1AP37088 669 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 ICA1Q05084 483 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 GRIN1Q05586 938 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 LRMPQ12912 555 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 PTK7Q13308 1070 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 CCL14Q16627 93 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 ABCB5Q2M3G0 1257 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 CCDC144BQ3MJ40 725 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 EARS2Q5JPH6 523 aaKnown RBP10.56□□□□□ -0.72
MSH3-203ENST00000512531 OLFML2BQ68BL8 750 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 PPP4R3AQ6IN85 833 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 KLHL10Q6JEL2 608 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 PDXDC2PQ6P474 469 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 SV2BQ7L1I2 683 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 CCAR2Q8N163 923 aaKnown RBP10.56□□□□□ -0.72
MSH3-203ENST00000512531 LRRC47Q8N1G4 583 aaKnown RBP10.56□□□□□ -0.72
MSH3-203ENST00000512531 SHCBP1Q8NEM2 672 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 ERMNQ8TAM6 284 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 TBCKQ8TEA7 893 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 MARVELD3Q96A59 401 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 C16orf45Q96MC5 204 aaPredicted RBP10.56□□□□□ -0.72
MSH3-203ENST00000512531 LBHD1Q9BQE6 289 aaPredicted RBP10.56□□□□□ -0.72
MSH3-203ENST00000512531 PSTPIP2Q9H939 334 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 HOXC10Q9NYD6 342 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 ITIH6Q6UXX5 1313 aa10.56□□□□□ -0.72
MSH3-203ENST00000512531 A0A1B0GTH6 734 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 AKR1B15C9JRZ8 316 aaPredicted RBP10.55□□□□□ -0.72
MSH3-203ENST00000512531 HRO43593 1189 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 ZNF18P17022 549 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 VCAM1P19320 739 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 SHMT1P34896 483 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 USP11P51784 963 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 CCZ1BP86790 482 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 CCZ1P86791 482 aaPredicted RBP10.55□□□□□ -0.72
MSH3-203ENST00000512531 IKQ13123 557 aaPredicted RBP10.55□□□□□ -0.72
MSH3-203ENST00000512531 PSMD2Q13200 908 aa10.55□□□□□ -0.72
MSH3-203ENST00000512531 PTPRNQ16849 979 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms