RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 ATF3P18847 181 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 SLC9A1P19634 815 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 FPR2P25090 351 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 RECQLP46063 649 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 GPR3P46089 330 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 AFF3P51826 1226 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 CDR1P51861 262 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 CORO7P57737 925 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 RHBDL3P58872 404 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ERVFRD-1P60508 538 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ZNF200P98182 395 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 IRF9Q00978 393 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 SPIRE1Q08AE8 756 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 UBE4AQ14139 1066 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 LRRC32Q14392 662 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 MLC1Q15049 377 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PWP2Q15269 919 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCBP2Q15366 365 aaKnown RBP eCLIP2.44□□□□□ -2.02
SMN2-208ENST00000508258 LCE4AQ5TA78 99 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ZC3H14Q6PJT7 736 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 RPTNQ6XPR3 784 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ARHGAP36Q6ZRI8 547 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 TTLL10Q6ZVT0 673 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 HDGFL2Q7Z4V5 671 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 SLCO6A1Q86UG4 719 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PTRH1Q86Y79 214 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 RIOX2Q8IUF8 465 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 TEX2Q8IWB9 1127 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 CMIPQ8IY22 773 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 CPA6Q8N4T0 437 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 KIAA1958Q8N8K9 716 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ZNF610Q8N9Z0 462 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 UHMK1Q8TAS1 419 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 MZB1Q8WU39 189 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.44□□□□□ -2.02
SMN2-208ENST00000508258 LMBR1Q8WVP7 490 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 TRMT2BQ96GJ1 504 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 CHAMP1Q96JM3 812 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 JMJD8Q96S16 334 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ORAI2Q96SN7 254 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ELF4Q99607 663 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 ZDHHC5Q9C0B5 715 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PDGFDQ9GZP0 370 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 EPB41L1Q9H4G0 881 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ZMAT4Q9H898 229 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 CNTD2Q9H8S5 307 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ARNT2Q9HBZ2 717 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 GCM1Q9NP62 436 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 SLC6A20Q9NP91 592 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PARD6AQ9NPB6 346 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 LUC7LQ9NQ29 371 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 TOPORSQ9NS56 1045 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 C14orf119Q9NWQ9 140 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.44□□□□□ -2.02
SMN2-208ENST00000508258 GULP1Q9UBP9 304 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 IP6K2Q9UHH9 426 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PNMA8BQ9ULN7 279 aaPredicted RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 NOB1Q9ULX3 412 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 SRPK3Q9UPE1 567 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 ANKRD6Q9Y2G4 727 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 LUC7L2Q9Y383 392 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCDHGA9Q9Y5G4 932 aaKnown RBP2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCDHGA8Q9Y5G5 932 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCDHGA7Q9Y5G6 932 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCDHGA6Q9Y5G7 932 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCDHGA3Q9Y5H0 932 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 PCDHGA2Q9Y5H1 932 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 B3GALT1Q9Y5Z6 326 aa2.44□□□□□ -2.02
SMN2-208ENST00000508258 WASHC2AQ641Q2 1341 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 GOLGA6CA6NDK9 693 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 GOLGA6BA6NDN3 693 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 B8ZZF3 427 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 C22orf46C9J442 243 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 F8W031 263 aaPredicted RBP2.43□□□□□ -2.02
SMN2-208ENST00000508258 HRKO00198 91 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 BUB1BO60566 1050 aaPredicted RBP2.43□□□□□ -2.02
SMN2-208ENST00000508258 TADA3O75528 432 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 DGKIO75912 1065 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 SNUPNO95149 360 aaKnown RBP2.43□□□□□ -2.02
SMN2-208ENST00000508258 MT-CO1P00395 513 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 FUCA1P04066 466 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 CYP17A1P05093 508 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 MYL1P05976 194 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 GOLGA6DP0CG33 693 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 U2AF1L5P0DN76 240 aaPredicted RBP2.43□□□□□ -2.02
SMN2-208ENST00000508258 MYBL2P10244 700 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 PFKLP17858 780 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 KRT15P19012 456 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 HOXA5P20719 270 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 PTX3P26022 381 aaPredicted RBP2.43□□□□□ -2.02
SMN2-208ENST00000508258 LSP1P33241 339 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 EPHA5P54756 1037 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 YBX1P67809 324 aaKnown RBP2.43□□□□□ -2.02
SMN2-208ENST00000508258 U2AF1Q01081 240 aaKnown RBP eCLIP2.43□□□□□ -2.02
SMN2-208ENST00000508258 MOGSQ13724 837 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 GTF2H3Q13889 308 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 ODF1Q14990 250 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 PDCD1Q15116 288 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 SEC23AQ15436 765 aa2.43□□□□□ -2.02
SMN2-208ENST00000508258 ZNF174Q15697 407 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms