RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 AEBP2Q6ZN18 517 aaPredicted RBP9.4□□□□□ -0.9
SMN2-208ENST00000508258 CHIC1Q5VXU3 224 aa9.04□□□□□ -0.96
SMN2-208ENST00000508258 SENP3Q9H4L4 574 aaPredicted RBP8.03□□□□□ -1.12
SMN2-208ENST00000508258 PHF23Q9BUL5 403 aaPredicted RBP7.94□□□□□ -1.14
SMN2-208ENST00000508258 FOXD1Q16676 465 aa7.46□□□□□ -1.22
SMN2-208ENST00000508258 PLPPR3Q6T4P5 718 aa7.3□□□□□ -1.24
SMN2-208ENST00000508258 ADRA2BP18089 450 aa7.06□□□□□ -1.28
SMN2-208ENST00000508258 PPP6R1Q9UPN7 881 aa7.05□□□□□ -1.28
SMN2-208ENST00000508258 PIAS4Q8N2W9 510 aaPredicted RBP7.04□□□□□ -1.28
SMN2-208ENST00000508258 MSH5O43196 834 aa6.96□□□□□ -1.3
SMN2-208ENST00000508258 POTEDQ86YR6 584 aa6.59□□□□□ -1.35
SMN2-208ENST00000508258 SCAF1Q9H7N4 1312 aaKnown RBP6.49□□□□□ -1.37
SMN2-208ENST00000508258 MAPK8IP2Q13387 824 aaPredicted RBP6.46□□□□□ -1.38
SMN2-208ENST00000508258 PPP4R3CPQ6ZMV5 832 aa6.41□□□□□ -1.38
SMN2-208ENST00000508258 DMRT2Q9Y5R5 561 aa6.37□□□□□ -1.39
SMN2-208ENST00000508258 CNKSR2Q8WXI2 1034 aa6.26□□□□□ -1.41
SMN2-208ENST00000508258 DCAF8L1A6NGE4 600 aa6.22□□□□□ -1.41
SMN2-208ENST00000508258 NCBP3Q53F19 620 aaKnown RBP6.22□□□□□ -1.41
SMN2-208ENST00000508258 RNF216Q9NWF9 866 aaPredicted RBP6.17□□□□□ -1.42
SMN2-208ENST00000508258 HOXD11P31277 338 aaPredicted RBP6.15□□□□□ -1.42
SMN2-208ENST00000508258 NPM3O75607 178 aaKnown RBP6.1□□□□□ -1.43
SMN2-208ENST00000508258 KCNA4P22459 653 aa6.09□□□□□ -1.43
SMN2-208ENST00000508258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.96□□□□□ -1.46
SMN2-208ENST00000508258 CACNB1Q02641 598 aaPredicted RBP5.95□□□□□ -1.46
SMN2-208ENST00000508258 RNF39Q9H2S5 420 aa5.92□□□□□ -1.46
SMN2-208ENST00000508258 DNAJC5BQ9UF47 199 aa5.88□□□□□ -1.47
SMN2-208ENST00000508258 C1QBPQ07021 282 aaKnown RBP5.86□□□□□ -1.47
SMN2-208ENST00000508258 SLC4A1APQ9BWU0 796 aaKnown RBP5.8□□□□□ -1.48
SMN2-208ENST00000508258 U3KPZ7 1027 aaPredicted RBP5.78□□□□□ -1.48
SMN2-208ENST00000508258 SLC4A2P04920 1241 aa5.77□□□□□ -1.49
SMN2-208ENST00000508258 CAPN15O75808 1086 aa5.72□□□□□ -1.49
SMN2-208ENST00000508258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.69□□□□□ -1.5
SMN2-208ENST00000508258 HNRNPUL2Q1KMD3 747 aaKnown RBP5.69□□□□□ -1.5
SMN2-208ENST00000508258 SPINK5Q9NQ38 1064 aaPredicted RBP5.69□□□□□ -1.5
SMN2-208ENST00000508258 APLP2Q06481 763 aa5.68□□□□□ -1.5
SMN2-208ENST00000508258 TRHP20396 242 aaPredicted RBP5.66□□□□□ -1.5
SMN2-208ENST00000508258 SAMD1Q6SPF0 538 aaPredicted RBP5.66□□□□□ -1.5
SMN2-208ENST00000508258 FOXD4L1Q9NU39 408 aa5.66□□□□□ -1.5
SMN2-208ENST00000508258 MYCNP04198 464 aaPredicted RBP5.65□□□□□ -1.5
SMN2-208ENST00000508258 ZNF219Q9P2Y4 722 aaPredicted RBP5.61□□□□□ -1.51
SMN2-208ENST00000508258 ABCB7O75027 752 aa5.59□□□□□ -1.51
SMN2-208ENST00000508258 DSG3P32926 999 aa5.59□□□□□ -1.51
SMN2-208ENST00000508258 ZBTB22O15209 634 aa5.58□□□□□ -1.52
SMN2-208ENST00000508258 EHMT2Q96KQ7 1210 aa5.51□□□□□ -1.53
SMN2-208ENST00000508258 POLA2Q14181 598 aa5.5□□□□□ -1.53
SMN2-208ENST00000508258 ATF5Q9Y2D1 282 aaPredicted RBP5.5□□□□□ -1.53
SMN2-208ENST00000508258 ATXN8OSP0DMR3 200 aa5.43□□□□□ -1.54
SMN2-208ENST00000508258 CSRNP3Q8WYN3 585 aa5.42□□□□□ -1.54
SMN2-208ENST00000508258 ZBTB12Q9Y330 459 aaPredicted RBP5.39□□□□□ -1.55
SMN2-208ENST00000508258 RBM42Q9BTD8 480 aaKnown RBP5.36□□□□□ -1.55
SMN2-208ENST00000508258 FBLN2P98095 1184 aa5.33□□□□□ -1.56
SMN2-208ENST00000508258 OSCARQ8IYS5 282 aa5.32□□□□□ -1.56
SMN2-208ENST00000508258 MKRN4PQ13434 485 aaPredicted RBP5.24□□□□□ -1.57
SMN2-208ENST00000508258 AKT1S1Q96B36 256 aa5.24□□□□□ -1.57
SMN2-208ENST00000508258 SPDYE2BA6NHP3 402 aa5.21□□□□□ -1.58
SMN2-208ENST00000508258 SPDYE6P0CI01 402 aa5.21□□□□□ -1.58
SMN2-208ENST00000508258 SPDYE2Q495Y8 402 aa5.21□□□□□ -1.58
SMN2-208ENST00000508258 POTEHQ6S545 545 aa5.21□□□□□ -1.58
SMN2-208ENST00000508258 ZNF692Q9BU19 519 aaPredicted RBP5.21□□□□□ -1.58
SMN2-208ENST00000508258 CHRDL2Q6WN34 429 aa5.2□□□□□ -1.58
SMN2-208ENST00000508258 REM2Q8IYK8 340 aaPredicted RBP5.2□□□□□ -1.58
SMN2-208ENST00000508258 CLEC11AQ9Y240 323 aa5.16□□□□□ -1.58
SMN2-208ENST00000508258 PITPNM1O00562 1244 aa5.15□□□□□ -1.59
SMN2-208ENST00000508258 PABPN1Q86U42 306 aaKnown RBP eCLIP5.13□□□□□ -1.59
SMN2-208ENST00000508258 SSUH2Q9Y2M2 353 aa5.13□□□□□ -1.59
SMN2-208ENST00000508258 SPDYE1Q8NFV5 336 aaPredicted RBP5.11□□□□□ -1.59
SMN2-208ENST00000508258 SPDYE4A6NLX3 237 aa5.1□□□□□ -1.59
SMN2-208ENST00000508258 PIP4P2Q8N4L2 257 aa5.09□□□□□ -1.59
SMN2-208ENST00000508258 PRR29P0C7W0 189 aa5.06□□□□□ -1.6
SMN2-208ENST00000508258 PRKAR2AP13861 404 aaKnown RBP5.04□□□□□ -1.6
SMN2-208ENST00000508258 FXR2P51116 673 aaKnown RBP eCLIP5.04□□□□□ -1.6
SMN2-208ENST00000508258 HAX1O00165 279 aa5.02□□□□□ -1.61
SMN2-208ENST00000508258 CHADLQ6NUI6 762 aa5.02□□□□□ -1.61
SMN2-208ENST00000508258 STAG3Q9UJ98 1225 aa5□□□□□ -1.61
SMN2-208ENST00000508258 FKBP8Q14318 412 aa4.97□□□□□ -1.61
SMN2-208ENST00000508258 SP7Q8TDD2 431 aaPredicted RBP4.93□□□□□ -1.62
SMN2-208ENST00000508258 FARP1Q9Y4F1 1045 aaPredicted RBP4.92□□□□□ -1.62
SMN2-208ENST00000508258 CREBZFQ9NS37 354 aa4.91□□□□□ -1.62
SMN2-208ENST00000508258 EVX2Q03828 476 aa4.9□□□□□ -1.63
SMN2-208ENST00000508258 PROM2Q8N271 834 aa4.9□□□□□ -1.63
SMN2-208ENST00000508258 C19orf67A6NJJ6 358 aa4.89□□□□□ -1.63
SMN2-208ENST00000508258 PLEKHG5O94827 1062 aa4.89□□□□□ -1.63
SMN2-208ENST00000508258 CD44P16070 742 aaKnown RBP4.89□□□□□ -1.63
SMN2-208ENST00000508258 MIER1Q8N108 512 aa4.88□□□□□ -1.63
SMN2-208ENST00000508258 NPM1P06748 294 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMN2-208ENST00000508258 PLCD3Q8N3E9 789 aa4.87□□□□□ -1.63
SMN2-208ENST00000508258 PAK3O75914 559 aaPredicted RBP4.85□□□□□ -1.63
SMN2-208ENST00000508258 ZRANB1Q9UGI0 708 aa4.85□□□□□ -1.63
SMN2-208ENST00000508258 FBXO3Q9UK99 471 aa4.83□□□□□ -1.64
SMN2-208ENST00000508258 GABBR2O75899 941 aa4.82□□□□□ -1.64
SMN2-208ENST00000508258 MNX1P50219 401 aaPredicted RBP4.8□□□□□ -1.64
SMN2-208ENST00000508258 TSPYL2Q9H2G4 693 aaPredicted RBP4.8□□□□□ -1.64
SMN2-208ENST00000508258 ZBTB47Q9UFB7 747 aaPredicted RBP4.8□□□□□ -1.64
SMN2-208ENST00000508258 KLHL34Q8N239 644 aa4.78□□□□□ -1.64
SMN2-208ENST00000508258 ZNF579Q8NAF0 562 aaKnown RBP4.77□□□□□ -1.65
SMN2-208ENST00000508258 PHF12Q96QT6 1004 aa4.77□□□□□ -1.65
SMN2-208ENST00000508258 AMER1Q5JTC6 1135 aaPredicted RBP4.76□□□□□ -1.65
SMN2-208ENST00000508258 DCBLD2Q96PD2 775 aa4.76□□□□□ -1.65
SMN2-208ENST00000508258 RTN4Q9NQC3 1192 aaKnown RBP4.76□□□□□ -1.65
SMN2-208ENST00000508258 VASPP50552 380 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms