RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KCNJ6P48051 423 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 BFSP2Q13515 415 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 GPNMBQ14956 572 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 LETM2Q2VYF4 491 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 NEK8Q86SG6 692 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 DIS3L2Q8IYB7 885 aaKnown RBP14.84□□□□□ -0.03
TCOF1-209ENST00000506630 TMX3Q96JJ7 454 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 TBC1D22BQ9NU19 505 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 SIP14410 1827 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 EMSYQ7Z589 1322 aa14.84□□□□□ -0.03
TCOF1-209ENST00000506630 REV3LO60673 3130 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 FAM205CA6NFA0 338 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 BAIAP3O94812 1187 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 ZNF200P98182 395 aaPredicted RBP14.83□□□□□ -0.04
TCOF1-209ENST00000506630 GRB10Q13322 594 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 SAFBQ15424 915 aaKnown RBP eCLIP14.83□□□□□ -0.04
TCOF1-209ENST00000506630 TCTN1Q2MV58 587 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 Q4G0T1 1027 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 EARS2Q5JPH6 523 aaKnown RBP14.83□□□□□ -0.04
TCOF1-209ENST00000506630 MOXD1Q6UVY6 613 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 CCDC155Q8N6L0 562 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 DHX38Q92620 1227 aaKnown RBP14.83□□□□□ -0.04
TCOF1-209ENST00000506630 WNT8BQ93098 351 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 ZBED2Q9BTP6 218 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 SMARCAD1Q9H4L7 1026 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 ERAP1Q9NZ08 941 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 DDX25Q9UHL0 483 aaKnown RBP14.83□□□□□ -0.04
TCOF1-209ENST00000506630 PTPRSQ13332 1948 aa14.83□□□□□ -0.04
TCOF1-209ENST00000506630 PRRC2BQ5JSZ5 2229 aaKnown RBP14.82□□□□□ -0.04
TCOF1-209ENST00000506630 BTBD18B2RXH4 712 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 BACH1O14867 736 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 DHX15O43143 795 aaKnown RBP14.82□□□□□ -0.04
TCOF1-209ENST00000506630 CCNT1O60563 726 aaKnown RBP14.82□□□□□ -0.04
TCOF1-209ENST00000506630 GAS7O60861 476 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 GPR37L1O60883 481 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 LGR5O75473 907 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 CCNE2O96020 404 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 KRT76Q01546 638 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 LRCH2Q5VUJ6 765 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 ZNF746Q6NUN9 644 aaPredicted RBP14.82□□□□□ -0.04
TCOF1-209ENST00000506630 TNFRSF25Q93038 417 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 GJA10Q969M2 543 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 PCYT2Q99447 389 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 TEKT3Q9BXF9 490 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 RNPEPQ9H4A4 650 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 LMCD1Q9NZU5 365 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 CHD7Q9P2D1 2997 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 SAMM50Q9Y512 469 aa14.82□□□□□ -0.04
TCOF1-209ENST00000506630 CYP3A7-CYP3A51PA0A087WV96 503 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 SLC37A4O43826 429 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 ATG7O95352 703 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 GNAT1P11488 350 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 GCFC2P16383 781 aaKnown RBP14.81□□□□□ -0.04
TCOF1-209ENST00000506630 CYP3A7P24462 503 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 STAT5BP51692 787 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 PPFIA1Q13136 1202 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 GNL2Q13823 731 aaKnown RBP14.81□□□□□ -0.04
TCOF1-209ENST00000506630 FAM160B1Q5W0V3 765 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 MIS18BP1Q6P0N0 1132 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 ABHD15Q6UXT9 468 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 CCDC60Q8IWA6 550 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-209ENST00000506630 SMAP1Q8IYB5 467 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-209ENST00000506630 CAGE1Q8TC20 777 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 SLC5A5Q92911 643 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 ATP6V0A1Q93050 837 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 MBOAT7Q96N66 472 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 NAP1L4Q99733 375 aaKnown RBP14.81□□□□□ -0.04
TCOF1-209ENST00000506630 SETD4Q9NVD3 440 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 MICAL3Q7RTP6 2002 aa14.81□□□□□ -0.04
TCOF1-209ENST00000506630 TREHO43280 583 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 CHMP2AO43633 222 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 ARHGEF15O94989 841 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 HOXC8P31273 242 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 PTK7Q13308 1070 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 RIT2Q99578 217 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 OSBPL7Q9BZF2 842 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 ZNF302Q9NR11 478 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 NRCAMQ92823 1304 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 ARID2Q68CP9 1835 aa14.8□□□□□ -0.04
TCOF1-209ENST00000506630 WDR64B1ANS9 1081 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 MARCH6O60337 910 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 PSAPP07602 524 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 GJB2P29033 226 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 IGBP1P78318 339 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 PLCB4Q15147 1175 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 GRIK4Q16099 956 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 PPP4R3AQ6IN85 833 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 SWSAP1Q6NVH7 229 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 PDXDC2PQ6P474 469 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 PLPPR4Q7Z2D5 763 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 FBXO18Q8NFZ0 1043 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 ETNPPLQ8TBG4 499 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 AFAP1L1Q8TED9 768 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 UNC45AQ9H3U1 944 aa14.79□□□□□ -0.04
TCOF1-209ENST00000506630 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms