RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 RRAGBQ5VZM2 374 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 KANK3Q6NY19 840 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 USP49Q70CQ1 688 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 SESTD1Q86VW0 696 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 TPH2Q8IWU9 490 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 FSIP1Q8NA03 581 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 U2AF1L4Q8WU68 220 aaKnown RBP22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 DEFB118Q96PH6 123 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 PNMA5Q96PV4 448 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 UIMC1Q96RL1 719 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 TMEM106CQ9BVX2 250 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 LRRC27Q9C0I9 530 aa22.07■■□□□ 1.12
SCAMP3-209ENST00000497470 FRMPD3Q5JV73 1810 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 WDR81Q562E7 1941 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 LOXHD1Q8IVV2 1947 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 EYA4O95677 639 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 OATP04181 439 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 MYL1P05976 194 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 CDC25AP30304 524 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 SYKP43405 635 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 SP4Q02446 784 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 KCNA10Q16322 511 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 FMR1NBQ8N0W7 255 aaPredicted RBP22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 KAT2BQ92831 832 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 LENG1Q96BZ8 264 aaPredicted RBP22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 KIAA1024Q9UPX6 916 aa22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 MYH9P35579 1960 aaKnown RBP22.06■■□□□ 1.12
SCAMP3-209ENST00000497470 POTEB3A0JP26 581 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 RRN3P2A6NIE6 340 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 KBTBD13C9JR72 458 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 ASGR1P07306 291 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 SLFN14P0C7P3 912 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 ATP4AP20648 1035 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 HOXC8P31273 242 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 YWHABP31946 246 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 PRKCEQ02156 737 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 SNW1Q13573 536 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 TARBP2Q15633 366 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 NAALADL2Q58DX5 795 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 ZNF484Q5JVG2 852 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 SPECC1Q5M775 1068 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 CNNM4Q6P4Q7 775 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 POTEBQ6S5H4 581 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 BANK1Q8NDB2 785 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 TIPINQ9BVW5 301 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 DDX19AQ9NUU7 478 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 TELO2Q9Y4R8 837 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 SCN10AQ9Y5Y9 1956 aa22.05■■□□□ 1.12
SCAMP3-209ENST00000497470 A0A1B0GVL5 298 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 MYADML2A6NDP7 307 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 GAS2O43903 313 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 RPLP2P05387 115 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 PLCG1P19174 1290 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 NDUFA8P51970 172 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 ACLYP53396 1101 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 BEX3Q00994 111 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 AMPD3Q01432 767 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 CYP4A11Q02928 519 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 CTTNQ14247 550 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 KARSQ15046 597 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 PLCB4Q15147 1175 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 ECM1Q16610 540 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 UGCGQ16739 394 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 NFRKBQ6P4R8 1299 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 SYT2Q8N9I0 419 aaPredicted RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 RASSF8Q8NHQ8 419 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 LARP4BQ92615 738 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 JPH2Q9BR39 696 aaPredicted RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 TNMDQ9H2S6 317 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 BLOC1S4Q9NUP1 217 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 KBTBD4Q9NVX7 518 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 WRAP73Q9P2S5 460 aaPredicted RBP22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 NRCAMQ92823 1304 aa22.04■■□□□ 1.12
SCAMP3-209ENST00000497470 POLR2DO15514 142 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 ZNF202O95125 648 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 STAT6P42226 847 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 PSEN2P49810 448 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 SKOR2Q2VWA4 1001 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 UTP14CQ5TAP6 766 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 ANO5Q75V66 913 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 ZNF710Q8N1W2 664 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 RAD54LQ92698 747 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 GLT1D1Q96MS3 346 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 HTTP42858 3142 aa22.03■■□□□ 1.12
SCAMP3-209ENST00000497470 MAGEB2O15479 319 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 MYL3P08590 195 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 GNAT1P11488 350 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 PTGS1P23219 599 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 RFC5P40937 340 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 RARRES1P49788 294 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 MFSD10Q14728 455 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 C1orf53Q5VUE5 145 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 POTEGQ6S5H5 508 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 SLC43A3Q8NBI5 491 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 GOLPH3LQ9H4A5 285 aa22.02■■□□□ 1.12
SCAMP3-209ENST00000497470 A0A087X0B3 334 aa22.01■■□□□ 1.11
SCAMP3-209ENST00000497470 ACTN4O43707 911 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-209ENST00000497470 SORBS3O60504 671 aa22.01■■□□□ 1.11
SCAMP3-209ENST00000497470 DGAT1O75907 488 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms