RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PTPN1P18031 435 aaKnown RBP5.01□□□□□ -1.61
PTCD3-218ENST00000493430 RAC3P60763 192 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 PRKD1Q15139 912 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-218ENST00000493430 GPR19Q15760 415 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 MAMDC2Q7Z304 686 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-218ENST00000493430 MTDHQ86UE4 582 aaKnown RBP5.01□□□□□ -1.61
PTCD3-218ENST00000493430 TAX1BP1Q86VP1 789 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 ZFPM1Q8IX07 1006 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 CKAP2LQ8IYA6 745 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 PTPRN2Q92932 1015 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 CDC6Q99741 560 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 MRIQ9BWK5 157 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 RIC8BQ9NVN3 520 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 ARHGAP28Q9P2N2 729 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 SRPK3Q9UPE1 567 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 ZFR2Q9UPR6 939 aaKnown RBP5.01□□□□□ -1.61
PTCD3-218ENST00000493430 PTPN22Q9Y2R2 807 aa5.01□□□□□ -1.61
PTCD3-218ENST00000493430 TDRD9Q8NDG6 1382 aaKnown RBP5.01□□□□□ -1.61
PTCD3-218ENST00000493430 ARAP1Q96P48 1450 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 FAM90A27PA6NNH2 459 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 WNT9AO14904 365 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 STK10O94804 968 aaKnown RBP5□□□□□ -1.61
PTCD3-218ENST00000493430 NAT1P18440 290 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 ST5P78524 1137 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 SPATC1Q76KD6 591 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 FBXW5Q969U6 566 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 ZNF428Q96B54 188 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 PCDHA8Q9Y5H6 950 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 ATP23Q9Y6H3 246 aa5□□□□□ -1.61
PTCD3-218ENST00000493430 TRBV23-1A0A0A0MS06 115 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-218ENST00000493430 GSTA4O15217 222 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 PDPK1O15530 556 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 ADCY3O60266 1144 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 SLPIP03973 132 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 PDE6AP16499 860 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 GJA4P35212 333 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 SUMO1P63165 101 aaKnown RBP4.99□□□□□ -1.61
PTCD3-218ENST00000493430 GUCY1A3Q02108 690 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 TOP3AQ13472 1001 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-218ENST00000493430 WDR72Q3MJ13 1102 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 ZMAT1Q5H9K5 638 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 C16orf59Q7L2K0 433 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 OSTM1Q86WC4 334 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 PCDH19Q8TAB3 1148 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 SCYL1Q96KG9 808 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 ADOQ96SZ5 270 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 MSRB2Q9Y3D2 182 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 HS3ST3A1Q9Y663 406 aa4.99□□□□□ -1.61
PTCD3-218ENST00000493430 SOGA1O94964 1423 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 RUSC2Q8N2Y8 1516 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 PYGMP11217 842 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 CR2P20023 1033 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 COMTP21964 271 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 PTGS1P23219 599 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 ETV4P43268 484 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 SSRP1Q08945 709 aaKnown RBP4.98□□□□□ -1.61
PTCD3-218ENST00000493430 RASGRF1Q13972 1273 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 CRY1Q16526 586 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 RNF151Q2KHN1 245 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 MTERF2Q49AM1 385 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 FIGNQ5HY92 759 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 FAM209AQ5JX71 171 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 CXXC5Q7LFL8 322 aaKnown RBP4.98□□□□□ -1.61
PTCD3-218ENST00000493430 PTRH1Q86Y79 214 aaKnown RBP4.98□□□□□ -1.61
PTCD3-218ENST00000493430 ZBTB38Q8NAP3 1195 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-218ENST00000493430 EDAQ92838 391 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 ZNF341Q9BYN7 854 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 CCDC113Q9H0I3 377 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 GALNT8Q9NY28 637 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 PPP1R1BQ9UD71 204 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-218ENST00000493430 CTTNBP2Q8WZ74 1663 aa4.98□□□□□ -1.61
PTCD3-218ENST00000493430 SHROOM2Q13796 1616 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 CUL7Q14999 1698 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 ARVCFO00192 962 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 MAN2B1O00754 1011 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 RAD17O75943 681 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 AMY2AP04746 511 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 KRT15P19012 456 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 AMY2BP19961 511 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 RRADP55042 308 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 GABREP78334 506 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 FOXE3Q13461 319 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 FAM47CQ5HY64 1035 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 AGBL4Q5VU57 503 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 FUKQ8N0W3 1084 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 ZDHHC5Q9C0B5 715 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 INCENPQ9NQS7 918 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 PFDN2Q9UHV9 154 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 FBXO10Q9UK96 956 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 CBLCQ9ULV8 474 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 OAZ3Q9UMX2 235 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 NR2E1Q9Y466 385 aa4.97□□□□□ -1.61
PTCD3-218ENST00000493430 CCDC85CA6NKD9 419 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 CDC14BO60729 498 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 HMGCRP04035 888 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 C6orf222P0C671 652 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-218ENST00000493430 SRGAP2CP0DJJ0 459 aa4.96□□□□□ -1.62
PTCD3-218ENST00000493430 RBM25P49756 843 aaKnown RBP4.96□□□□□ -1.62
PTCD3-218ENST00000493430 JAM2P57087 298 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms