RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 MIER3Q7Z3K6 550 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 DEFB128Q7Z7B8 93 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 RSPH3Q86UC2 560 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 VWCEQ96DN2 955 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 GABBR1Q9UBS5 961 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 SIP14410 1827 aa12.02□□□□□ -0.49
CDC42SE1-206ENST00000492796 RSPH10B2B2RC85 870 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 BAIAP3O94812 1187 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 RSPH10BP0C881 870 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 IGBP1P78318 339 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZNF484Q5JVG2 852 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 CNKSR3Q6P9H4 555 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 CKAP2LQ8IYA6 745 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 GJA10Q969M2 543 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 LRCH3Q96II8 777 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 VAV3Q9UKW4 847 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 CEP131Q9UPN4 1083 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 PCDHA2Q9Y5H9 948 aa12.01□□□□□ -0.49
CDC42SE1-206ENST00000492796 HSFX4A0A1B0GTS1 333 aaPredicted RBP12□□□□□ -0.49
CDC42SE1-206ENST00000492796 SMIM35A0A1B0GVV1 85 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 HSFX3A0A1B0GWH4 333 aaPredicted RBP12□□□□□ -0.49
CDC42SE1-206ENST00000492796 MARCH6O60337 910 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 NEMFO60524 1076 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 NBNO60934 754 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 OATP04181 439 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 ATP4AP20648 1035 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 GJB2P29033 226 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 TRAPPC10P48553 1259 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 GPNMBQ14956 572 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 CALCRLQ16602 461 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 FAM26DQ5JW98 314 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 RUFY4Q6ZNE9 571 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 HAS1Q92839 578 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 SMC3Q9UQE7 1217 aa12□□□□□ -0.49
CDC42SE1-206ENST00000492796 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 DLL1O00548 723 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 DKC1O60832 514 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 EFCAB14O75071 495 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 CTSHP09668 335 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 U2AF2P26368 475 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■□□□ 11.5
CDC42SE1-206ENST00000492796 PRKCEQ02156 737 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 CUL4AQ13619 759 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 MTHFD1LQ6UB35 978 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 NME8Q8N427 588 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 TRAPPC12Q8WVT3 735 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 SLC9A7Q96T83 725 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 NRBP2Q9NSY0 501 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 CXXC1Q9P0U4 656 aaPredicted RBP11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 SLC4A7Q9Y6M7 1214 aa11.99□□□□□ -0.49
CDC42SE1-206ENST00000492796 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 GBF1Q92538 1859 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZBTB42B2RXF5 422 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 KIF28PB7ZC32 967 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 M0QZ92 97 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 MAGEB2O15479 319 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 ZNF862O60290 1169 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 KCNJ6P48051 423 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 PSMC5P62195 406 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 MRPS6P82932 125 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 SPIRE1Q08AE8 756 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 MGAT3Q09327 533 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 UGCGQ16739 394 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 XKR3Q5GH77 459 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 IER5Q5VY09 327 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 FAM109BQ6ICB4 259 aaPredicted RBP11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 PHOSPHO2Q8TCD6 241 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 DNAJB3Q8WWF6 145 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 APBB2Q92870 758 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 FAM49AQ9H0Q0 323 aaPredicted RBP11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 MICAL3Q7RTP6 2002 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 LAMA3Q16787 3333 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 PTPRSQ13332 1948 aa11.98□□□□□ -0.49
CDC42SE1-206ENST00000492796 KDM3AQ9Y4C1 1321 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 H3BQV1 296 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 EML1O00423 815 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 WNT7AO00755 349 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 C22orf31O95567 290 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 P4HBP07237 508 aaKnown RBP11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 ATP2A2P16615 1042 aaKnown RBP11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 KLRC1P26715 233 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 MCM7P33993 719 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 QARSP47897 775 aaKnown RBP11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 IKBKEQ14164 716 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 EPHA7Q15375 998 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 RAB30Q15771 203 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 PLEKHG4Q58EX7 1191 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 TTC38Q5R3I4 469 aa11.97□□□□□ -0.49
CDC42SE1-206ENST00000492796 NCAPH2Q6IBW4 605 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms