RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 NCLP19338 710 aaKnown RBP17.64■□□□□ 0.41
C9orf3-219ENST00000488186 PRKCEQ02156 737 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 SPIRE1Q08AE8 756 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 CTTNQ14247 550 aaKnown RBP17.64■□□□□ 0.41
C9orf3-219ENST00000488186 GRIK4Q16099 956 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 KRT79Q5XKE5 535 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 HAUS3Q68CZ6 603 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 CCDC43Q96MW1 224 aaKnown RBP17.64■□□□□ 0.41
C9orf3-219ENST00000488186 USP28Q96RU2 1077 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 RGL1Q9NZL6 768 aa17.64■□□□□ 0.41
C9orf3-219ENST00000488186 KIAA0355O15063 1070 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 CD4P01730 458 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-219ENST00000488186 FAAP100Q0VG06 881 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 UGCGQ16739 394 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 XKR3Q5GH77 459 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 ZNF484Q5JVG2 852 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 OTUD6AQ7L8S5 288 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 CCDC155Q8N6L0 562 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 LXNQ9BS40 222 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 FTOQ9C0B1 505 aaKnown RBP eCLIP17.63■□□□□ 0.41
C9orf3-219ENST00000488186 SEPT9Q9UHD8 586 aaPredicted RBP17.63■□□□□ 0.41
C9orf3-219ENST00000488186 IGSF9BQ9UPX0 1349 aa17.63■□□□□ 0.41
C9orf3-219ENST00000488186 SLITRK3O94933 977 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 CYP2C9P11712 490 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 ATP4AP20648 1035 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 BMP8BP34820 402 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 CCT6AP40227 531 aaKnown RBP17.62■□□□□ 0.41
C9orf3-219ENST00000488186 ZNF200P98182 395 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-219ENST00000488186 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 PRO3102Q9H379 93 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 PDLIM7Q9NR12 457 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 ZMYND8Q9ULU4 1186 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-219ENST00000488186 ZDHHC9Q9Y397 364 aa17.62■□□□□ 0.41
C9orf3-219ENST00000488186 TREHO43280 583 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 ZNF862O60290 1169 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 RAG1P15918 1043 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 PTK7Q13308 1070 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 BFSP2Q13515 415 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 SLC39A14Q15043 492 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 ZRSR1Q15695 479 aaKnown RBP17.61■□□□□ 0.41
C9orf3-219ENST00000488186 IL17AQ16552 155 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 RSPH3Q86UC2 560 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 C4orf19Q8IY42 314 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 IGSF22Q8N9C0 903 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 SNX29Q8TEQ0 813 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 LMBR1Q8WVP7 490 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 CDK5RAP3Q96JB5 506 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 GDF15Q99988 308 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 HSD17B14Q9BPX1 270 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-219ENST00000488186 TUFT1Q9NNX1 390 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 TUBE1Q9UJT0 475 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 TBX21Q9UL17 535 aa17.61■□□□□ 0.41
C9orf3-219ENST00000488186 KAT6AQ92794 2004 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 RANBP2P49792 3224 aaKnown RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 A0A1W2PPC1 479 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 SPTLC2O15270 562 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 YEATS4O95619 227 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 SYN1P17600 705 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 KLRC1P26715 233 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 RPA1P27694 616 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 YWHABP31946 246 aaKnown RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 LONP1P36776 959 aaKnown RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 UBA7P41226 1012 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 NASPP49321 788 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 KRT85P78386 507 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 DNM1Q05193 864 aaKnown RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 PTPAQ15257 358 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 MTERF2Q49AM1 385 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 RASSF8Q8NHQ8 419 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 TRAPPC12Q8WVT3 735 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 AK8Q96MA6 479 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 LBHD1Q9BQE6 289 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 HIPK3Q9H422 1215 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 CIZ1Q9ULV3 898 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 COL1A2P08123 1366 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 LTBP2Q14767 1821 aa17.6■□□□□ 0.41
C9orf3-219ENST00000488186 MYH9P35579 1960 aaKnown RBP17.6■□□□□ 0.41
C9orf3-219ENST00000488186 MAGEB2O15479 319 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 MED24O75448 989 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 TBC1D8BQ0IIM8 1120 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 TAF2Q6P1X5 1199 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 MTHFD1LQ6UB35 978 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 SH3RF1Q7Z6J0 888 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 CATSPER3Q86XQ3 398 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 EXOC8Q8IYI6 725 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 METTL13Q8N6R0 699 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 KRI1Q8N9T8 703 aaKnown RBP17.59■□□□□ 0.41
C9orf3-219ENST00000488186 LINC00301Q8NCQ3 95 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 KCNG4Q8TDN1 519 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 CEP170P1Q96L14 293 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 IPO9Q96P70 1041 aaKnown RBP17.59■□□□□ 0.41
C9orf3-219ENST00000488186 NACC1Q96RE7 527 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 NIFKQ9BYG3 293 aaKnown RBP17.59■□□□□ 0.41
C9orf3-219ENST00000488186 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
C9orf3-219ENST00000488186 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
C9orf3-219ENST00000488186 TRIM43BA6NCK2 446 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms