RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 GLRX3O76003 335 aaKnown RBP11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 ZBED1O96006 694 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 ATICP31939 592 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 MXI1P50539 228 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 RASA2Q15283 850 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 EZH2Q15910 746 aaKnown RBP11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 PTPN21Q16825 1174 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 WDR45BQ5MNZ6 344 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 LRRC8BQ6P9F7 803 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 KLHL35Q6PF15 583 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 B3GNT6Q6ZMB0 384 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 TRIM67Q6ZTA4 783 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 VPS36Q86VN1 386 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 ST13P4Q8IZP2 240 aaPredicted RBP11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 DCLK2Q8N568 766 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 RUFY2Q8WXA3 655 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 AASDHPPTQ9NRN7 309 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 SEPT10Q9P0V9 454 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 ATP7BP35670 1465 aa11.2□□□□□ -0.62
PRPF4B-206ENST00000481109 FRMPD1Q5SYB0 1578 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 CFAP69A5D8W1 941 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 TGFB3P10600 412 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 COL6A2P12110 1019 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 CMA1P23946 247 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 LIFRP42702 1097 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 ERVK-24P63145 666 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 TUBA3CQ13748 450 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 IDI1Q13907 227 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 TRIM14Q14142 442 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 DGCR14Q96DF8 476 aaKnown RBP11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 KLHL4Q9C0H6 718 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 RXFP1Q9HBX9 757 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 GUCA1BQ9UMX6 200 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 USP20Q9Y2K6 914 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 CAPN6Q9Y6Q1 641 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 MYO3AQ8NEV4 1616 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 A0A0G2JS52 829 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 SH3PXD2BA1X283 911 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 KIF28PB7ZC32 967 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 CCNCP24863 283 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 SLC16A2P36021 539 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 ETV3P41162 512 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 SEPT6Q14141 434 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 WTAPQ15007 396 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 METTL21CQ5VZV1 264 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 C8orf74Q6P047 294 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 KIF2BQ8N4N8 673 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 SUN5Q8TC36 379 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 ASCC2Q9H1I8 757 aaPredicted RBP11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 LRMDAQ9H2I8 198 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 COMMD10Q9Y6G5 202 aa11.19□□□□□ -0.62
PRPF4B-206ENST00000481109 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 PASKQ96RG2 1323 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 MAGEB3O15480 346 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 SNX3O60493 162 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 TSPAN1O60635 241 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 ETS2P15036 469 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 RASA1P20936 1047 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 TUFMP49411 452 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 NR1D2Q14995 579 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 ZNF423Q2M1K9 1284 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 ODF2Q5BJF6 829 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 C6orf183Q5T699 404 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 TSHZ3Q63HK5 1081 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 TMEM214Q6NUQ4 689 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 ZC3H18Q86VM9 953 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 DDX42Q86XP3 938 aaKnown RBP eCLIP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 RIBC1Q8N443 379 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 NELFBQ8WX92 580 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 MED30Q96HR3 178 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 PPP1R10Q96QC0 940 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 HEPHQ9BQS7 1158 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 TXLNGQ9NUQ3 528 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 CRNNQ9UBG3 495 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 NFE2L3Q9Y4A8 694 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 TRIM17Q9Y577 477 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 PPLO60437 1756 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 COL3A1P02461 1466 aaPredicted RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 PDS5AQ29RF7 1337 aaKnown RBP11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 RASA4BC9J798 803 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 RASA4O43374 803 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 DTNBO60941 627 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 PEX14O75381 377 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 UNC5CO95185 931 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 GJB6O95452 261 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 MYL6BP14649 208 aa11.18□□□□□ -0.62
PRPF4B-206ENST00000481109 KIF11P52732 1056 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms