RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 STAG2Q8N3U4 1231 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 ESR2Q92731 530 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 PPP2R3CQ969Q6 453 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 GPR20Q99678 358 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 KAT14Q9H8E8 782 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
GPNMB-211ENST00000479625 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 B4E1Z4 1266 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 PPP1R3GB7ZBB8 358 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 PROB1E7EW31 1015 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 PARP1P09874 1014 aaKnown RBP11.25□□□□□ -0.61
GPNMB-211ENST00000479625 GNAT1P11488 350 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 IBSPP21815 317 aaPredicted RBP11.25□□□□□ -0.61
GPNMB-211ENST00000479625 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
GPNMB-211ENST00000479625 FBXO47Q5MNV8 452 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 METTL7BQ6UX53 244 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 FCHSD1Q86WN1 690 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 DGKHQ86XP1 1220 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 CMTR2Q8IYT2 770 aaKnown RBP11.25□□□□□ -0.61
GPNMB-211ENST00000479625 ENAHQ8N8S7 591 aaPredicted RBP11.25□□□□□ -0.61
GPNMB-211ENST00000479625 ZBTB10Q96DT7 871 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 APOL5Q9BWW9 433 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 AMNQ9BXJ7 453 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 SMOC2Q9H3U7 446 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
GPNMB-211ENST00000479625 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 CDH22Q9UJ99 828 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 FAM186AA6NE01 2351 aa11.25□□□□□ -0.61
GPNMB-211ENST00000479625 MYO10Q9HD67 2058 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 GVINP1Q7Z2Y8 2422 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 TGFB3P10600 412 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
GPNMB-211ENST00000479625 CD52P31358 61 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 E2F4Q16254 413 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 TMEM105Q8N8V8 129 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 DNAJB3Q8WWF6 145 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 SUSD6Q92537 303 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 EVI5LQ96CN4 794 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 USP26Q9BXU7 913 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 SLC4A5Q9BY07 1137 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 TLE6Q9H808 572 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 ZNF215Q9UL58 517 aaPredicted RBP11.24□□□□□ -0.61
GPNMB-211ENST00000479625 CDY2AQ9Y6F7 541 aa11.24□□□□□ -0.61
GPNMB-211ENST00000479625 RIF1Q5UIP0 2472 aaKnown RBP11.24□□□□□ -0.61
GPNMB-211ENST00000479625 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
GPNMB-211ENST00000479625 MARK3P27448 753 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 PROX2Q3B8N5 592 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 ZBTB33Q86T24 672 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 RTN4RL1Q86UN2 441 aaPredicted RBP11.23□□□□□ -0.61
GPNMB-211ENST00000479625 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 ATP8B4Q8TF62 1192 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 RIPOR3Q96MK2 946 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 INPP4AQ96PE3 977 aaPredicted RBP11.23□□□□□ -0.61
GPNMB-211ENST00000479625 ZSCAN10Q96SZ4 725 aaPredicted RBP11.23□□□□□ -0.61
GPNMB-211ENST00000479625 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
GPNMB-211ENST00000479625 RTEL1Q9NZ71 1219 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 TUBE1Q9UJT0 475 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 PCDHA1Q9Y5I3 950 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 FRMPD4Q14CM0 1322 aa11.23□□□□□ -0.61
GPNMB-211ENST00000479625 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 ZBTB5O15062 677 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 TCF7P36402 384 aaPredicted RBP11.22□□□□□ -0.61
GPNMB-211ENST00000479625 NBL1P41271 181 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 TMEM62Q0P6H9 643 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 PPFIA1Q13136 1202 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 NEDD9Q14511 834 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 NBR1Q14596 966 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 DUSP6Q16828 381 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 GNPTABQ3T906 1256 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 NAALADL2Q58DX5 795 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 FRMD5Q7Z6J6 570 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 NPAS4Q8IUM7 802 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 KREMEN2Q8NCW0 462 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 NRCAMQ92823 1304 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 MTMR8Q96EF0 704 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 FAM49AQ9H0Q0 323 aaPredicted RBP11.22□□□□□ -0.61
GPNMB-211ENST00000479625 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
GPNMB-211ENST00000479625 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.61
GPNMB-211ENST00000479625 ZNF213O14771 459 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 FIBPO43427 364 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 BRD1O95696 1058 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 POLR2MP0CAP2 368 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 ID4P47928 161 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 ERVFC1P60507 584 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 IGBP1P78318 339 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
GPNMB-211ENST00000479625 APOBRQ0VD83 1088 aa11.21□□□□□ -0.61
GPNMB-211ENST00000479625 GRIK4Q16099 956 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms