RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SLC26A4O43511 780 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 INSRRP14616 1297 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 TXKP42681 527 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 CHMP4BP1P59074 171 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 PRKCEQ02156 737 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 RESTQ13127 1097 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 PTGDRQ13258 359 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 ZNF174Q15697 407 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 SH3RF1Q7Z6J0 888 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 RSPH3Q86UC2 560 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 C4orf19Q8IY42 314 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 CKAP2LQ8IYA6 745 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 EXOC8Q8IYI6 725 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 RETREG2Q8NC44 543 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 HSD17B14Q9BPX1 270 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 NIFKQ9BYG3 293 aaKnown RBP15.39■□□□□ 0.05
LIMD1-203ENST00000465039 PRO3102Q9H379 93 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 ZSWIM4Q9H7M6 989 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 SETD4Q9NVD3 440 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 ZMYND8Q9ULU4 1186 aaPredicted RBP15.39■□□□□ 0.05
LIMD1-203ENST00000465039 PCDHB6Q9Y5E3 794 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 PCDHA2Q9Y5H9 948 aa15.39■□□□□ 0.05
LIMD1-203ENST00000465039 EML1O00423 815 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 ZNF862O60290 1169 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 XRCC6P12956 609 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMD1-203ENST00000465039 SELPP16109 830 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 ATP2B1P20020 1258 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 ATP4AP20648 1035 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 MARK3P27448 753 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 MAGEA10P43363 369 aaPredicted RBP15.38■□□□□ 0.05
LIMD1-203ENST00000465039 FPGSQ05932 587 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 PPIGQ13427 754 aaKnown RBP eCLIP15.38■□□□□ 0.052e-8■□□□□ 11.3
LIMD1-203ENST00000465039 TRIM71Q2Q1W2 868 aaKnown RBP15.38■□□□□ 0.05
LIMD1-203ENST00000465039 MARCH8Q5T0T0 291 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 ATL3Q6DD88 541 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 IGSF22Q8N9C0 903 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 GJA10Q969M2 543 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 JPH2Q9BR39 696 aaPredicted RBP15.38■□□□□ 0.05
LIMD1-203ENST00000465039 TUFT1Q9NNX1 390 aa15.38■□□□□ 0.05
LIMD1-203ENST00000465039 RANBP2P49792 3224 aaKnown RBP15.38■□□□□ 0.05
LIMD1-203ENST00000465039 SMIM35A0A1B0GVV1 85 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 ZBTB42B2RXF5 422 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 TREHO43280 583 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 CYP2C9P11712 490 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 SYN1P17600 705 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 TARBP2Q15633 366 aaKnown RBP15.37■□□□□ 0.05
LIMD1-203ENST00000465039 NCAPH2Q6IBW4 605 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 PSRC1Q6PGN9 363 aaPredicted RBP15.37■□□□□ 0.05
LIMD1-203ENST00000465039 DTHD1Q6ZMT9 781 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 LRRC8DQ7L1W4 858 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 NME8Q8N427 588 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 DHX38Q92620 1227 aaKnown RBP15.37■□□□□ 0.05
LIMD1-203ENST00000465039 AK8Q96MA6 479 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 LXNQ9BS40 222 aa15.37■□□□□ 0.05
LIMD1-203ENST00000465039 POLR3CQ9BUI4 534 aaPredicted RBP15.37■□□□□ 0.05
LIMD1-203ENST00000465039 TRIP12Q14669 1992 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-203ENST00000465039 GAS2O43903 313 aaKnown RBP15.36■□□□□ 0.05
LIMD1-203ENST00000465039 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-203ENST00000465039 CKBP12277 381 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 RPA1P27694 616 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 HIC1Q14526 733 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 UGCGQ16739 394 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 FAM26DQ5JW98 314 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 OTUD6AQ7L8S5 288 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 FERMT3Q86UX7 667 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 RPUSD2Q8IZ73 545 aaKnown RBP15.36■□□□□ 0.05
LIMD1-203ENST00000465039 BADQ92934 168 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 UIMC1Q96RL1 719 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 EIF2AK1Q9BQI3 630 aaKnown RBP15.36■□□□□ 0.05
LIMD1-203ENST00000465039 WNT8AQ9H1J5 351 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 SQORQ9Y6N5 450 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 LOXHD1Q8IVV2 1947 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 KDM3AQ9Y4C1 1321 aa15.36■□□□□ 0.05
LIMD1-203ENST00000465039 POTEMA6NI47 508 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 SLITRK3O94933 977 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 STBD1O95210 358 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 C22orf31O95567 290 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 IQCF3P0C7M6 154 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 ITGB8P26012 769 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 CYP2C18P33260 490 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 RFC5P40937 340 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 CDC42EP1Q00587 391 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 MTHFD1LQ6UB35 978 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 PPP1R12CQ9BZL4 782 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 IL23AQ9NPF7 189 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 ANKEF1Q9NU02 776 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 LRWD1Q9UFC0 647 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 MYH15Q9Y2K3 1946 aa15.35■□□□□ 0.05
LIMD1-203ENST00000465039 TRIOBPQ9H2D6 2365 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 CXCL10P02778 98 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 KLRC1P26715 233 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 TMOD1P28289 359 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 YWHABP31946 246 aaKnown RBP15.34■□□□□ 0.05
LIMD1-203ENST00000465039 TECP42680 631 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 TBC1D8BQ0IIM8 1120 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 NBR1Q14596 966 aa15.34■□□□□ 0.05
LIMD1-203ENST00000465039 IER5Q5VY09 327 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms