RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 MYBPC2Q14324 1141 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 LBRQ14739 615 aaKnown RBP8.35□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF174Q15697 407 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 ABCB5Q2M3G0 1257 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 SPECC1LQ69YQ0 1117 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 CIAPIN1Q6FI81 312 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PPP4R3AQ6IN85 833 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 TRAPPC11Q7Z392 1133 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 ZNF579Q8NAF0 562 aaKnown RBP8.35□□□□□ -1.07
HDAC9-218ENST00000456174 DAGLBQ8NCG7 672 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
HDAC9-218ENST00000456174 NDST4Q9H3R1 872 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 LZTFL1Q9NQ48 299 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PICK1Q9NRD5 415 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 NYAP2Q9P242 653 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 KIF4AO95239 1232 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 GSTA1P08263 222 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 EEF2P13639 858 aaKnown RBP8.35□□□□□ -1.07
HDAC9-218ENST00000456174 FECHP22830 423 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PSMC4P43686 418 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 NAPAP54920 295 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 SEPT2Q15019 361 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 KIAA0753Q2KHM9 967 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 CMPK2Q5EBM0 449 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 RAD9BQ6WBX8 426 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 TMEM179Q6ZVK1 233 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 FAM114A1Q8IWE2 563 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 MTMR14Q8NCE2 650 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 RASGRP4Q8TDF6 673 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 FAM151AQ8WW52 585 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 OSBPL1AQ9BXW6 950 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PHACTR1Q9C0D0 580 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 ZMYND12Q9H0C1 365 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 TSPYL2Q9H2G4 693 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-218ENST00000456174 BAIAP2L1Q9UHR4 511 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 KCNH3Q9ULD8 1083 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PCDHA6Q9UN73 950 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 PCDHA8Q9Y5H6 950 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 GMEB1Q9Y692 573 aa8.35□□□□□ -1.07
HDAC9-218ENST00000456174 CCDC194A0A1B0GVG4 234 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 LRRD1A4D1F6 860 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 M0R2N6 131 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 GDF11O95390 407 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 MDH1P40925 334 aaKnown RBP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 MTF1Q14872 753 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 TNIP1Q15025 636 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 GPATCH4Q5T3I0 446 aaKnown RBP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 RBM26Q5T8P6 1007 aaKnown RBP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 NCAPH2Q6IBW4 605 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 CSRNP2Q9H175 543 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 C6orf50Q9HD87 102 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 PCMTD2Q9NV79 361 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 BIN2Q9UBW5 565 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 HERC5Q9UII4 1024 aaKnown RBP8.34□□□□□ -1.07
HDAC9-218ENST00000456174 CNTNAP1P78357 1384 aa8.34□□□□□ -1.07
HDAC9-218ENST00000456174 DPPA5A6NC42 116 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 SMCO2A6NFE2 343 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 CFAP73A6NFT4 308 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 hCG_1984214I3L0E3 225 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 GNA11P29992 359 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 MCM7P33993 719 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 PTGER2P43116 358 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 GJA8P48165 433 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 ATP2C1P98194 919 aaPredicted RBP8.34□□□□□ -1.08
HDAC9-218ENST00000456174 CKAP4Q07065 602 aaKnown RBP8.34□□□□□ -1.08
HDAC9-218ENST00000456174 PTGDRQ13258 359 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 LONRF3Q496Y0 759 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 Q4G0T1 1027 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 FKBP1CQ5VVH2 108 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 KCTD1Q719H9 257 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 SIAH1Q8IUQ4 282 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 ADGRF4Q8IZF3 695 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 ZNF713Q8N859 430 aaPredicted RBP8.34□□□□□ -1.08
HDAC9-218ENST00000456174 CCT6BQ92526 530 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 FERMT2Q96AC1 680 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 JMJD4Q9H9V9 463 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.34□□□□□ -1.08
HDAC9-218ENST00000456174 ATXN10Q9UBB4 475 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 TUBE1Q9UJT0 475 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 WDR37Q9Y2I8 494 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 C2CD2Q9Y426 696 aa8.34□□□□□ -1.08
HDAC9-218ENST00000456174 SOWAHDA6NJG2 315 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 GH2P01242 217 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 CCND1P24385 295 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 SLC16A2P36021 539 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 ADKP55263 362 aaKnown RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 JAG1P78504 1218 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 MPP3Q13368 585 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 NNTQ13423 1086 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 BYSLQ13895 437 aaKnown RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 ZNF268Q14587 947 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 RRP1BQ14684 758 aaKnown RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 GLE1Q53GS7 698 aaKnown RBP8.33□□□□□ -1.08
HDAC9-218ENST00000456174 SLFN13Q68D06 897 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 ARMC9Q7Z3E5 817 aa8.33□□□□□ -1.08
HDAC9-218ENST00000456174 LCA5Q86VQ0 697 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms