RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 MCAMP43121 646 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 SPATA4Q8NEY3 305 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 EFHD1Q9BUP0 239 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 HDAC6Q9UBN7 1215 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 NCAPD2Q15021 1401 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 POLGP54098 1239 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-207ENST00000453963 CAV1Q03135 178 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 ALCAMQ13740 583 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 ALX1Q15699 326 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-207ENST00000453963 EPHA10Q5JZY3 1008 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 ST13P4Q8IZP2 240 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-207ENST00000453963 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.33
SEC16A-207ENST00000453963 DPF2Q92785 391 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 SLITRK6Q9H5Y7 841 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 CAPN11Q9UMQ6 739 aa12.96□□□□□ -0.33
SEC16A-207ENST00000453963 SHROOM2Q13796 1616 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 A0A1B0GTH6 734 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.34
SEC16A-207ENST00000453963 BIRC2Q13490 618 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 HLFQ16534 295 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 ATG16L1Q676U5 607 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 PDIK1LQ8N165 341 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 SYT2Q8N9I0 419 aaPredicted RBP12.96□□□□□ -0.34
SEC16A-207ENST00000453963 CHMP6Q96FZ7 201 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 CENPKQ9BS16 269 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 DRC3Q9H069 523 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 CACYBPQ9HB71 228 aaKnown RBP12.96□□□□□ -0.34
SEC16A-207ENST00000453963 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.96□□□□□ -0.34
SEC16A-207ENST00000453963 KLC4Q9NSK0 619 aa12.96□□□□□ -0.34
SEC16A-207ENST00000453963 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.34
SEC16A-207ENST00000453963 IQANK1A0A1B0GTG1 560 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 KIF1CO43896 1103 aaKnown RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 PPP1R37O75864 691 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 CPP00450 1065 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 ATP1A1P05023 1023 aaKnown RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 ABCD1P33897 745 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 ORC2Q13416 577 aaPredicted RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 KCTD2Q14681 263 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 COA7Q96BR5 231 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 SDCCAG3Q96C92 435 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 HAUS8Q9BT25 410 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 PI4KBQ9UBF8 816 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 RASGRP2Q7LDG7 609 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 SGMS1Q86VZ5 419 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 ATP6V0A1Q93050 837 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■□□□ 12.5
SEC16A-207ENST00000453963 ZNF577Q9BSK1 485 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 TRIM55Q9BYV6 548 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 TET3O43151 1660 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 A6NJR5 290 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 STMN1P16949 149 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 PMS2P54278 862 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 MTF1Q14872 753 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 TMED8Q6PL24 325 aaPredicted RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 METTL16Q86W50 562 aaKnown RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 RNF169Q8NCN4 708 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 ANO3Q9BYT9 981 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 COA1Q9GZY4 146 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 CCDC68Q9H2F9 335 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 LIMA1Q9UHB6 759 aaKnown RBP12.95□□□□□ -0.34
SEC16A-207ENST00000453963 FAM187AA6NFU0 413 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 SPECC1L-ADORA2AF8WAN1 911 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 BMP3P12645 472 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 FAM160B1Q5W0V3 765 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 DNAJC24Q6P3W2 148 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 CHD1O14646 1710 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
SEC16A-207ENST00000453963 PALM3A6NDB9 673 aaPredicted RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 MGEA5O60502 916 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 GDF11O95390 407 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 GSTA1P08263 222 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 GSTA2P09210 222 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 EXOSC10Q01780 885 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 ACTN3Q08043 901 aaPredicted RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 LLGL1Q15334 1064 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 TRIP13Q15645 432 aaPredicted RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 SPOUT1Q5T280 376 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 USP17L2Q6R6M4 530 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 KCTD1Q719H9 257 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 ESYT3A0FGR9 886 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 CDC27P30260 824 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 PYROXD1Q8WU10 500 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 NARFQ9UHQ1 456 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 SNX12Q9UMY4 172 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 NEDD4P46934 1319 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 ITIH6Q6UXX5 1313 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 MEIS1O00470 390 aa12.94□□□□□ -0.34
SEC16A-207ENST00000453963 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
SEC16A-207ENST00000453963 DNAJC8O75937 253 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms