RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
SMPD4-208ENST00000439029 ZNF215Q9UL58 517 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-208ENST00000439029 PADI3Q9ULW8 664 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 PCDHB7Q9Y5E2 793 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 HCFC2Q9Y5Z7 792 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 MYH6P13533 1939 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
SMPD4-208ENST00000439029 CFAP47Q6ZTR5 3102 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 NARSO43776 548 aaKnown RBP11.31□□□□□ -0.6
SMPD4-208ENST00000439029 FGRP09769 529 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 TGFB3P10600 412 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 RFX1P22670 979 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 PAK2Q13177 524 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 SEMA3FQ13275 785 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 GRIK4Q16099 956 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 ZDHHC14Q8IZN3 488 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 CASP10Q92851 521 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 NECTIN4Q96NY8 510 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 SEMA4AQ9H3S1 761 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 JMJD4Q9H9V9 463 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 TUBE1Q9UJT0 475 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 USP24Q9UPU5 2620 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
SMPD4-208ENST00000439029 CACNA1IQ9P0X4 2223 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
SMPD4-208ENST00000439029 CFHP08603 1231 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 FGFR1P11362 822 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 MTHFRP42898 656 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 NFX1Q12986 1120 aaKnown RBP11.3□□□□□ -0.6
SMPD4-208ENST00000439029 MARCH8Q5T0T0 291 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
SMPD4-208ENST00000439029 METTL7BQ6UX53 244 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 RASGRP4Q8TDF6 673 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 MRPS27Q92552 414 aaKnown RBP11.3□□□□□ -0.6
SMPD4-208ENST00000439029 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 MAF1Q9H063 256 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 PCDHA1Q9Y5I3 950 aa11.3□□□□□ -0.6
SMPD4-208ENST00000439029 FNDC1Q4ZHG4 1894 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-208ENST00000439029 SPATA31C2B4DYI2 1134 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 MGEA5O60502 916 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 PPP1R11O60927 126 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-208ENST00000439029 EOMESO95936 686 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 DCNP07585 359 aaKnown RBP11.29□□□□□ -0.6
SMPD4-208ENST00000439029 SP9P0CG40 484 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 SARSP49591 514 aaKnown RBP11.29□□□□□ -0.6
SMPD4-208ENST00000439029 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
SMPD4-208ENST00000439029 ITIH3Q06033 890 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 TDGQ13569 410 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 NEDD9Q14511 834 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 MIER1Q8N108 512 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 TTC14Q96N46 770 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 AMNQ9BXJ7 453 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 CWH43Q9H720 699 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 CYP26B1Q9NR63 512 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 PUF60Q9UHX1 559 aaKnown RBP11.29□□□□□ -0.6
SMPD4-208ENST00000439029 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 GINS2Q9Y248 185 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
SMPD4-208ENST00000439029 KRBA1A5PL33 1030 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 FGAP02671 866 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-208ENST00000439029 TCF7P36402 384 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-208ENST00000439029 KIAA0319Q5VV43 1072 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 SUMF1Q8NBK3 374 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 OTUD7AQ8TE49 926 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-208ENST00000439029 TRAPPC12Q8WVT3 735 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 RSAD2Q8WXG1 361 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
SMPD4-208ENST00000439029 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 NCDNQ9UBB6 729 aa11.28□□□□□ -0.6
SMPD4-208ENST00000439029 MBLAC1A4D2B0 266 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-208ENST00000439029 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 POTEMA6NI47 508 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 M0QZ92 97 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 EPCAMP16422 314 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 LAG3P18627 525 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 PDE4AP27815 886 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-208ENST00000439029 GNPTABQ3T906 1256 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 IER5Q5VY09 327 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 KIAA1841Q6NSI8 718 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 ZC3H14Q6PJT7 736 aaKnown RBP11.27□□□□□ -0.61
SMPD4-208ENST00000439029 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 LRRC55Q6ZSA7 311 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 GLG1Q92896 1179 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 ADAM2Q99965 735 aa11.27□□□□□ -0.61
SMPD4-208ENST00000439029 KAT14Q9H8E8 782 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms