RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 PPIGQ13427 754 aaKnown RBP eCLIP9.24□□□□□ -0.938e-7■■□□□ 12.7
RPE-204ENST00000411934 PLCB4Q15147 1175 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 GRIK4Q16099 956 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 XKR3Q5GH77 459 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 ZNF484Q5JVG2 852 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 HAUS3Q68CZ6 603 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 RSPH3Q86UC2 560 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 C4orf19Q8IY42 314 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 LMBR1Q8WVP7 490 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 TRIM43Q96BQ3 446 aaPredicted RBP9.24□□□□□ -0.93
RPE-204ENST00000411934 PRO3102Q9H379 93 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 RNPEPQ9H4A4 650 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 TTC12Q9H892 705 aaPredicted RBP9.24□□□□□ -0.93
RPE-204ENST00000411934 PRDM5Q9NQX1 630 aaPredicted RBP9.24□□□□□ -0.93
RPE-204ENST00000411934 TRMT13Q9NUP7 481 aaKnown RBP9.24□□□□□ -0.93
RPE-204ENST00000411934 TUBE1Q9UJT0 475 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 TRPC6Q9Y210 931 aa9.24□□□□□ -0.93
RPE-204ENST00000411934 SMIM35A0A1B0GVV1 85 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 VPS37CA5D8V6 355 aaPredicted RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 WNT7AO00755 349 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 MAGEB2O15479 319 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 OATP04181 439 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 INSRRP14616 1297 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 SELPP16109 830 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 QARSP47897 775 aaKnown RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 TOB1P50616 345 aaPredicted RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 ATP2C1P98194 919 aaPredicted RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 PRKCEQ02156 737 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 FPGSQ05932 587 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 PDIA5Q14554 519 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 SWSAP1Q6NVH7 229 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 NME8Q8N427 588 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 ERMNQ8TAM6 284 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 CTAGE1Q96RT6 745 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 JPH2Q9BR39 696 aaPredicted RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 TRPV6Q9H1D0 765 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 ZSWIM4Q9H7M6 989 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 TUFT1Q9NNX1 390 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 NRBP2Q9NSY0 501 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 GABBR1Q9UBS5 961 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 ZMYND8Q9ULU4 1186 aaPredicted RBP9.23□□□□□ -0.93
RPE-204ENST00000411934 SQORQ9Y6N5 450 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 LOXHD1Q8IVV2 1947 aa9.23□□□□□ -0.93
RPE-204ENST00000411934 CEP290O15078 2479 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 CHMP2AO43633 222 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 MARK3P27448 753 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 MAGEA10P43363 369 aaPredicted RBP9.22□□□□□ -0.93
RPE-204ENST00000411934 CDC42EP1Q00587 391 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 RESTQ13127 1097 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 PTGDRQ13258 359 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 FAM26DQ5JW98 314 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 SH3RF1Q7Z6J0 888 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 CKAP2LQ8IYA6 745 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 RPUSD2Q8IZ73 545 aaKnown RBP9.22□□□□□ -0.93
RPE-204ENST00000411934 C4orf32Q8N8J7 132 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 IGSF22Q8N9C0 903 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
RPE-204ENST00000411934 AK8Q96MA6 479 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 HSD17B14Q9BPX1 270 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 LXNQ9BS40 222 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 POLR3CQ9BUI4 534 aaPredicted RBP9.22□□□□□ -0.93
RPE-204ENST00000411934 NIFKQ9BYG3 293 aaKnown RBP9.22□□□□□ -0.93
RPE-204ENST00000411934 WNT8AQ9H1J5 351 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 TMEM60Q9H2L4 133 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 SETD4Q9NVD3 440 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 MTMR6Q9Y217 621 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 SSUH2Q9Y2M2 353 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 TELO2Q9Y4R8 837 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 PCDHB6Q9Y5E3 794 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 PCDHA2Q9Y5H9 948 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 MYH15Q9Y2K3 1946 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 KDM3AQ9Y4C1 1321 aa9.22□□□□□ -0.93
RPE-204ENST00000411934 ZBTB42B2RXF5 422 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 EML1O00423 815 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 TREHO43280 583 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 ZNF862O60290 1169 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 EFCAB14O75071 495 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 CXCL10P02778 98 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 CYP2C9P11712 490 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 CKBP12277 381 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 XRCC6P12956 609 aaKnown RBP eCLIP9.21□□□□□ -0.94
RPE-204ENST00000411934 SYN1P17600 705 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 ATP4AP20648 1035 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 RPA1P27694 616 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 TMOD1P28289 359 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 TXKP42681 527 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 TARBP2Q15633 366 aaKnown RBP9.21□□□□□ -0.94
RPE-204ENST00000411934 ZNF174Q15697 407 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 MARCH8Q5T0T0 291 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
RPE-204ENST00000411934 NCAPH2Q6IBW4 605 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 MTHFD1LQ6UB35 978 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 LRRC8DQ7L1W4 858 aa9.21□□□□□ -0.94
RPE-204ENST00000411934 OTUD6AQ7L8S5 288 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms