RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 SHOX2O60902 331 aaPredicted RBP11.33□□□□□ -0.6
TUBB-208ENST00000396389 ZBED4O75132 1171 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 PGK2P07205 417 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 CETPP11597 493 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 XBP1P17861 261 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 APLP1P51693 650 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 APBA1Q02410 837 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 UBXN1Q04323 297 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 CDKAL1Q5VV42 579 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 LRRC1Q9BTT6 524 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 PORCNQ9H237 461 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 KCNH4Q9UQ05 1017 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 NDUFAB1O14561 156 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 EIF3HO15372 352 aaKnown RBP eCLIP11.33□□□□□ -0.6
TUBB-208ENST00000396389 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
TUBB-208ENST00000396389 FKBP1BP68106 108 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 PPP2R5BQ15173 497 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
TUBB-208ENST00000396389 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 WASF1Q92558 559 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 LZTS2Q9BRK4 669 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
TUBB-208ENST00000396389 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 TRPA1O75762 1119 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 KRT14P02533 472 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 SSBP05455 408 aaKnown RBP eCLIP11.32□□□□□ -0.6
TUBB-208ENST00000396389 DSG3P32926 999 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 STAT3P40763 770 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 RCAN1P53805 252 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 SEC24CP53992 1094 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 NPY5RQ15761 445 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 TTMPQ5BVD1 217 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 RNF187Q5TA31 235 aaPredicted RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 EEPD1Q7L9B9 569 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 TRMT1LQ7Z2T5 733 aaKnown RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 OTOFQ9HC10 1997 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 FAM155AB1AL88 458 aaPredicted RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 OPLAHO14841 1288 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 KRT2P35908 639 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 KLK7P49862 253 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 ADCY7P51828 1080 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 COPB1P53618 953 aaKnown RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 GUCY1A3Q02108 690 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 PPFIA1Q13136 1202 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 TUBB2AQ13885 445 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 ZNF174Q15697 407 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 LETM2Q2VYF4 491 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 SYMPKQ92797 1274 aaKnown RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 TUBB2BQ9BVA1 445 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 PHF20Q9BVI0 1012 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 RNF146Q9NTX7 359 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 ATAD5Q96QE3 1844 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 FRMD3A2A2Y4 597 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 MCM7P33993 719 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 VEGFBP49765 207 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 OTUD6BQ8N6M0 293 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 SPATA20Q8TB22 786 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 RBPJLQ9UBG7 517 aa11.32□□□□□ -0.6
TUBB-208ENST00000396389 ZNF214Q9UL59 606 aaPredicted RBP11.32□□□□□ -0.6
TUBB-208ENST00000396389 ERCC3P19447 782 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 DNA2P51530 1060 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 SF3A3Q12874 501 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBB-208ENST00000396389 KIAA1328Q86T90 577 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 FAM160B2Q86V87 743 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
TUBB-208ENST00000396389 RANBP17Q9H2T7 1088 aaKnown RBP11.31□□□□□ -0.6
TUBB-208ENST00000396389 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 GDAQ9Y2T3 454 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 RBAK-RBAKDNI3L0D1 243 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 BACH1O14867 736 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 MYCP01106 439 aaPredicted RBP11.31□□□□□ -0.6
TUBB-208ENST00000396389 IDEP14735 1019 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
TUBB-208ENST00000396389 FNTAP49354 379 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
TUBB-208ENST00000396389 CYP2W1Q8TAV3 490 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 PCDHA6Q9UN73 950 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 PCDHA4Q9UN74 947 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 PCDHA8Q9Y5H6 950 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 SRPRBQ9Y5M8 271 aaKnown RBP11.31□□□□□ -0.6
TUBB-208ENST00000396389 DOCK1Q14185 1865 aa11.31□□□□□ -0.6
TUBB-208ENST00000396389 STK36Q9NRP7 1315 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 SLC10A3P09131 477 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 RPS6P62753 249 aaKnown RBP11.3□□□□□ -0.6
TUBB-208ENST00000396389 CNTN2Q02246 1040 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 CRHR2Q13324 411 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 BAATQ14032 418 aaPredicted RBP11.3□□□□□ -0.6
TUBB-208ENST00000396389 BTNL9Q6UXG8 535 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 GBP6Q6ZN66 633 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 CUL5Q93034 780 aa11.3□□□□□ -0.6
TUBB-208ENST00000396389 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms